RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IDH3AP50213 366 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 SUOXP51687 545 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 RCN2Q14257 317 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 GPR158Q5T848 1215 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 PDCD6IPQ8WUM4 868 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 MOCOSQ96EN8 888 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 RILPQ96NA2 401 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 HACD3Q9P035 362 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 ARMCX1Q9P291 453 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 INTS6Q9UL03 887 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 CCL26Q9Y258 94 aa21.36■■□□□ 1.01
UBE2D3-216ENST00000503742 LINC01553A4QN01 128 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 FGF19O95750 216 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 PRSS56P0CW18 603 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 CD70P32970 193 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 ABL2P42684 1182 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 NAGLUP54802 743 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 DNAJB13P59910 316 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 PFKPQ01813 784 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 UBE3AQ05086 875 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 ACAP2Q15057 778 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 PLEKHG6Q3KR16 790 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 CMTM8Q8IZV2 173 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 TXNDC5Q8NBS9 432 aaKnown RBP21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 RIN3Q8TB24 985 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 CCDC106Q9BWC9 280 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 TLE6Q9H808 572 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 ABCB8Q9NUT2 735 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 RAP2CQ9Y3L5 183 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 NOTCH4Q99466 2003 aa21.35■■□□□ 1.01
UBE2D3-216ENST00000503742 CHRNGP07510 517 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 RBP1P09455 135 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PTPN2P17706 415 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 CALB2P22676 271 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 ATP5F1P24539 256 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 CSNK1DP48730 415 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 ASPHQ12797 758 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 USP4Q13107 963 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PIM3Q86V86 326 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 TREML1Q86YW5 311 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PARP9Q8IXQ6 854 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 RAB3IPQ96QF0 476 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 TCF12Q99081 682 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 C17orf80Q9BSJ5 609 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 AARSD1Q9BTE6 412 aaKnown RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 ILKAPQ9H0C8 392 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 POPDC3Q9HBV1 291 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 MAN1C1Q9NR34 630 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 POLR3BQ9NW08 1133 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 SORCS3Q9UPU3 1222 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 RWDD3Q9Y3V2 267 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PCDHB9Q9Y5E1 797 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 CXorf51AA0A1B0GTR3 108 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 ZNF821O75541 412 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PGLSO95336 258 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PMLP29590 882 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 RIPK1Q13546 671 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 CAMK1Q14012 370 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 PTPRRQ15256 657 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 TEAD2Q15562 447 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 ARL13AQ5H913 290 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 KLC3Q6P597 504 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 LSMEM2Q8N112 164 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 EFHBQ8N7U6 833 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 LPGAT1Q92604 370 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 USP13Q92995 863 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 TBC1D10AQ9BXI6 508 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 TM6SF2Q9BZW4 377 aa21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 APOBEC2Q9Y235 224 aaKnown RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 MTF2Q9Y483 593 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-216ENST00000503742 C5orf67F2Z3F1 127 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 H7C0S8 307 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 CYBBP04839 570 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 HOXA9P31269 272 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 EPGNQ6UW88 154 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 SPRED2Q7Z698 418 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 METTL3Q86U44 580 aaKnown RBP21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 PIH1D2Q8WWB5 315 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 ACSS2Q9NR19 701 aa21.33■■□□□ 1.01
UBE2D3-216ENST00000503742 VGLL3A8MV65 326 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 NPHS1O60500 1241 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 PIGNO95427 931 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 RHOP08100 348 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 IRS1P35568 1242 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 CCR10P46092 362 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 ALDH18A1P54886 795 aaKnown RBP21.32■■□□□ 1
UBE2D3-216ENST00000503742 ARMC12Q5T9G4 340 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 SGF29Q96ES7 293 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 MYO19Q96H55 970 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 COG4Q9H9E3 785 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 MAGEE1Q9HCI5 957 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 FKBPLQ9UIM3 349 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.32■■□□□ 1
UBE2D3-216ENST00000503742 SOBPA7XYQ1 873 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 STX7O15400 261 aaKnown RBP21.32■■□□□ 1
UBE2D3-216ENST00000503742 HTRA2O43464 458 aaPredicted RBP21.32■■□□□ 1
UBE2D3-216ENST00000503742 SLC4A1P02730 911 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 MPSTP25325 297 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 HK2P52789 917 aa21.32■■□□□ 1
UBE2D3-216ENST00000503742 PRKAA1Q13131 559 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms