RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 NUS1Q96E22 293 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 OXNAD1Q96HP4 312 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 SPATA13Q96N96 652 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 UBP1Q9NZI7 540 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 SPTBN4Q9H254 2564 aa18.24■□□□□ 0.51
PDLIM7-209ENST00000503346 DOCK9Q9BZ29 2069 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 A0A0U1RQS6 177 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 LOC285095A0A1B0GVY8 99 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 C5orf60A6NFR6 353 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 CBFA2T3O75081 653 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 NDST3O95803 873 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 ETV3P41162 512 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 GRK6P43250 576 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 NOVA1P51513 510 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 WNT3AP56704 352 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 PTSQ03393 145 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 MPP3Q13368 585 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 PPM1JQ5JR12 505 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 DENND2CQ68D51 928 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 MACC1Q6ZN28 852 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 Q6ZVL8 140 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 ERMP1Q7Z2K6 904 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 KANSL1Q7Z3B3 1105 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 KDELC2Q7Z4H8 507 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 PLA2G15Q8NCC3 412 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 CAMK1GQ96NX5 476 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 APOOQ9BUR5 198 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 PCOLCE2Q9UKZ9 415 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 JRKLQ9Y4A0 524 aa18.23■□□□□ 0.51
PDLIM7-209ENST00000503346 CSF2P04141 144 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 ITGAVP06756 1048 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 HOXC4P09017 264 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 C1SP09871 688 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 TRIM23P36406 574 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 THOP1P52888 689 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 DPTQ07507 201 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 CCDC173Q0VFZ6 552 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 BNIP3Q12983 259 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 EIF2B5Q13144 721 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 NFATC4Q14934 902 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 INAVAQ3KP66 663 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 PSAPL1Q6NUJ1 521 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 PNCKQ6P2M8 343 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 NLRP8Q86W28 1048 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 GATAD2AQ86YP4 633 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 NRSN1Q8IZ57 195 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 BAHD1Q8TBE0 780 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 CCDC110Q8TBZ0 833 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 SETD7Q8WTS6 366 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 MRGPRX2Q96LB1 330 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 GORASP1Q9BQQ3 440 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 MAGEE1Q9HCI5 957 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 BTBD3Q9Y2F9 522 aa18.22■□□□□ 0.51
PDLIM7-209ENST00000503346 KNL1Q8NG31 2342 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 ASCC3Q8N3C0 2202 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 C1orf232A0A0U1RR37 186 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 GOLGA8CPA6NN73 597 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 F5H423 210 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 GIPC1O14908 333 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 LIASO43766 372 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 PIAS2O75928 621 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 ANXA9O76027 345 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 CLDN7O95471 211 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 ATXN1LP0C7T5 689 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 NME1P15531 152 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 TSHRP16473 764 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 TEAD1P28347 426 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 GEMP55040 296 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 KIAA1024LP59773 190 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 SIX1Q15475 284 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 OASLQ15646 514 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 RFLNAQ6ZTI6 216 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 ZNF765Q7L2R6 523 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 KLHDC8BQ8IXV7 354 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 PELI3Q8N2H9 469 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 FAM71DQ8N9W8 422 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 ATG4AQ8WYN0 398 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 PPP1R2P1Q96PQ5 205 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 SRPK1Q96SB4 655 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 DNAJC28Q9NX36 388 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 TRMT1Q9NXH9 659 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 AAR2Q9Y312 384 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 OR1A2Q9Y585 309 aa18.21■□□□□ 0.51
PDLIM7-209ENST00000503346 RGSL1A5PLK6 1076 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 K7ESM1 405 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 ENC1O14682 589 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 GCATO75600 419 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 DGKAP23743 735 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 PSMB4P28070 264 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 HTR1BP28222 390 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.51e-16■■■■■ 57.8
PDLIM7-209ENST00000503346 PRPSAP1Q14558 356 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 ZNF542PQ5EBM4 170 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 IPMKQ8NFU5 416 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 CCHCR1Q8TD31 782 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 RHBDD1Q8TEB9 315 aa18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 FUBP1Q96AE4 644 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-209ENST00000503346 RTP4Q96DX8 246 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms