RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 NAE1Q13564 534 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 RNPS1Q15287 305 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 GPATCH4Q5T3I0 446 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 SLC9C2Q5TAH2 1124 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 METTL2BQ6P1Q9 378 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 MTSS1LQ765P7 747 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 SLC35F3Q8IY50 421 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 NAGSQ8N159 534 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 MUC20Q8N307 709 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 OR13A1Q8NGR1 328 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 KLHL29Q96CT2 875 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 PABPC5Q96DU9 382 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 RNF125Q96EQ8 232 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 SAAL1Q96ER3 474 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 METTL2AQ96IZ6 378 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 FEM1CQ96JP0 617 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 GLIS2Q9BZE0 524 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 TKTL2Q9H0I9 626 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 KCNN2Q9H2S1 579 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 SDF2L1Q9HCN8 221 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 PCDHB16Q9NRJ7 776 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 KCND2Q9NZV8 630 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 MPP6Q9NZW5 540 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 ERVK-11Q9UQG0 969 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF711Q9Y462 761 aa2.49□□□□□ -2.01
SMAD1-203ENST00000502342 LRRFIP2Q9Y608 721 aaKnown RBP2.49□□□□□ -2.01
SMAD1-203ENST00000502342 USP17L23D6RBM5 183 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF587BE7ETH6 402 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 BMPR1BO00238 502 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 NCAM2O15394 837 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SOCS5O75159 536 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 RFPL2O75678 378 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 EIF3JO75822 258 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SEC31AO94979 1220 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CETPP11597 493 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 RRM1P23921 792 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 MT3P25713 68 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 BDKRB2P30411 391 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 GNL1P36915 607 aaPredicted RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 TMPOP42166 694 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 METAP2P50579 478 aaKnown RBP eCLIP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SEC61BP60468 96 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 PDE1BQ01064 536 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SLC20A2Q08357 652 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ZBTB17Q13105 803 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ZRSR1Q15695 479 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 BAK1Q16611 211 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 GSTA3Q16772 222 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SYT16Q17RD7 645 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 COL28A1Q2UY09 1125 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 OTUD3Q5T2D3 398 aaPredicted RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 STPG1Q5TH74 334 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 GFI1BQ5VTD9 330 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 GGNBP1Q5YKI7 109 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 TXNDC8Q6A555 127 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SIGIRRQ6IA17 410 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 C9orf139Q6ZV77 190 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 GSTA5Q7RTV2 222 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SLC46A3Q7Z3Q1 461 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 FOXRED2Q8IWF2 684 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ODF3L1Q8IXM7 274 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ZNF34Q8IZ26 560 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SPATA6LQ8N4H0 392 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ESX1Q8N693 406 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 LMNTD1Q8N9Z9 388 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 ZBTB8BQ8NAP8 495 aaPredicted RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 HMGCLL1Q8TB92 370 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 MAGEC3Q8TD91 643 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 NR4A3Q92570 626 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 HTRA1Q92743 480 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CDCA5Q96FF9 252 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CMKLR1Q99788 373 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SH3GL2Q99962 352 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 MKKSQ9NPJ1 570 aaPredicted RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 HINT3Q9NQE9 182 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 TINAGQ9UJW2 476 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SLC13A4Q9UKG4 626 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SARDHQ9UL12 918 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CAMK2AQ9UQM7 478 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 AAR2Q9Y312 384 aaKnown RBP2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CYP46A1Q9Y6A2 500 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CEPT1Q9Y6K0 416 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 STON1Q9Y6Q2 735 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 SCINQ9Y6U3 715 aa2.48□□□□□ -2.01
SMAD1-203ENST00000502342 CGNL1Q0VF96 1302 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 A0A0B4J293 547 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 EIF3CLB5ME19 914 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 C16orf97H3BN30 126 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 NPHP1O15259 732 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 KRT86O43790 486 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 GAS8-AS1O95177 125 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CRYAAP02489 173 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 DDX5P17844 614 aaKnown RBP2.47□□□□□ -2.01
SMAD1-203ENST00000502342 MCM3P25205 808 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 ABCD3P28288 659 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 ABCD1P33897 745 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CPOXP36551 454 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 FMO5P49326 533 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 CLCNKAP51800 687 aa2.47□□□□□ -2.01
SMAD1-203ENST00000502342 FUT6P51993 359 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms