RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SLC45A4Q5BKX6 768 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 ACAD10Q6JQN1 1059 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 FBXL22Q6P050 247 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 WDR73Q6P4I2 378 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 TMEM255BQ8WV15 326 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 TANKQ92844 425 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 IL17FQ96PD4 163 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 NDST4Q9H3R1 872 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 UBN1Q9NPG3 1134 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 PCDHB16Q9NRJ7 776 aa3.79□□□□□ -1.8
CD46-218ENST00000496723 UTYO14607 1347 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 A0A1B0GVC2 190 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 HNRNPCL2B2RXH8 293 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 USP17L23D6RBM5 183 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 NTN3O00634 580 aaPredicted RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 GRID2O43424 1007 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 PLGP00747 810 aaPredicted RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 LINC00271P0C7V0 271 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 SRCP12931 536 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 EPHA8P29322 1005 aaPredicted RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 HARS2P49590 506 aaKnown RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 METAP2P50579 478 aaKnown RBP eCLIP3.78□□□□□ -1.8
CD46-218ENST00000496723 EIF3BP55884 814 aaKnown RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 NAE1Q13564 534 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 TNFAIP1Q13829 316 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 FGFBP1Q14512 234 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 CTF1Q16619 201 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 GSTA3Q16772 222 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 COL28A1Q2UY09 1125 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 ZNF718Q3SXZ3 478 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 FAM76BQ5HYJ3 339 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 QSOX2Q6ZRP7 698 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 TAOK1Q7L7X3 1001 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 HAPLN4Q86UW8 402 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 FOXRED2Q8IWF2 684 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 SPATA20Q8TB22 786 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 NEK9Q8TD19 979 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 NR1H4Q96RI1 486 aaPredicted RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 KCNN2Q9H2S1 579 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 HINT3Q9NQE9 182 aaKnown RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 SLC6A13Q9NSD5 602 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 ZNF224Q9NZL3 707 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 PGAP2Q9UHJ9 254 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 SIX4Q9UIU6 781 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 TINAGQ9UJW2 476 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 ERVK-11Q9UQG0 969 aa3.78□□□□□ -1.8
CD46-218ENST00000496723 AAR2Q9Y312 384 aaKnown RBP3.78□□□□□ -1.8
CD46-218ENST00000496723 SCN5AQ14524 2016 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 MID1O15344 667 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 BUB3O43684 328 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 TIPRLO75663 272 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 RFPL2O75678 378 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 HOXB5P09067 269 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 ATP1A3P13637 1013 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 MAOAP21397 527 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 CDAP32320 146 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 DDIT3P35638 169 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 CASP6P55212 293 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 NLRP5P59047 1200 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 BRWD1-AS2P59051 145 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 POU3F1Q03052 451 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 ALG11Q2TAA5 492 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 ZNF672Q499Z4 452 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 HSP90AB4PQ58FF6 505 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 OTUD3Q5T2D3 398 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 WBP2NLQ6ICG8 309 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 METTL2BQ6P1Q9 378 aaKnown RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 INO80CQ6PI98 192 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 UNQ6126/PRO20091Q6UXV3 157 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 CCNI2Q6ZMN8 369 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 KRBA2Q6ZNG9 492 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 CNTROBQ8N137 903 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 SPATA6LQ8N4H0 392 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 IL17REQ8NFR9 667 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 METTL2AQ96IZ6 378 aaKnown RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 SLC41A2Q96JW4 573 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 SEC62Q99442 399 aaKnown RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 FAM110AQ9BQ89 295 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 USP44Q9H0E7 712 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 PPP1R3EQ9H7J1 279 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 PRKRIP1Q9H875 184 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 JMJD4Q9H9V9 463 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 BRF2Q9HAW0 419 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 C1RLQ9NZP8 487 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 HAO1Q9UJM8 370 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 INTS6Q9UL03 887 aaKnown RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 KCNS2Q9ULS6 477 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 TTC7AQ9ULT0 858 aaPredicted RBP3.77□□□□□ -1.81
CD46-218ENST00000496723 VDAC3Q9Y277 283 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 CEPT1Q9Y6K0 416 aa3.77□□□□□ -1.81
CD46-218ENST00000496723 KDM3AQ9Y4C1 1321 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 A0A0G2JPF8 293 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 CCDC189A1A4V9 331 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 HNRNPCL3B7ZW38 293 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 TULP2O00295 520 aa3.76□□□□□ -1.81
CD46-218ENST00000496723 CREB3O43889 395 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms