RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TEX44Q53QW1 395 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 BICRALQ6AI39 1079 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 SCYL2Q6P3W7 929 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 CNSTQ6PJW8 725 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 USP17L2Q6R6M4 530 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 EPGNQ6UW88 154 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF600Q6ZNG1 722 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 CDKL3Q8IVW4 592 aaPredicted RBP8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 METTL4Q8N3J2 472 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF276Q8N554 614 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 WDR36Q8NI36 951 aaKnown RBP8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 NARS2Q96I59 477 aaKnown RBP8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 MCEEQ96PE7 176 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 MUC13Q9H3R2 512 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 PCDHAC2Q9Y5I4 1007 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 MED1Q15648 1581 aaPredicted RBP8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 ROBO3Q96MS0 1386 aa8.2□□□□□ -1.1
CRNKL1-205ENST00000496549 HUS1O60921 280 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FDX1P10109 184 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 EIF2DP41214 584 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 GABARAPL2P60520 117 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SSTP61278 116 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CCNA1P78396 465 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 GBE1Q04446 702 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PDK2Q15119 407 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TRIP4Q15650 581 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 EPC2Q52LR7 807 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 BHLHB9Q6PI77 547 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CDHR3Q6ZTQ4 885 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC7A14Q8TBB6 771 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TCEAL3Q969E4 200 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MYDGFQ969H8 173 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 LGALS12Q96DT0 336 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 HYLS1Q96M11 299 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MUS81Q96NY9 551 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PCDHB18PQ96TA0 734 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 EYA3Q99504 573 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 C12orf57Q99622 126 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 HOPXQ9BPY8 73 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CCDC32Q9BV29 185 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RSAD1Q9HA92 442 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SNX15Q9NRS6 342 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 BTG4Q9NY30 223 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NDUFAF1Q9Y375 327 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ATRNO75882 1429 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MRC1P22897 1456 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 LRP6O75581 1613 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM240BA0A1B0GVZ2 78 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 AGAP5A6NIR3 686 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 A8MUA0 341 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 KPNA5O15131 536 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SLITRK5O94991 958 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PRKAR1AP10644 381 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 IL1R1P14778 569 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 KCNK10P57789 538 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SESN2P58004 480 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 GSTO1P78417 241 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NFYCQ13952 458 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CLCA4Q14CN2 919 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PDIA6Q15084 440 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SMAD1Q15797 465 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 C2CD6Q53TS8 623 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 STXBP5Q5T5C0 1151 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ANKRD22Q5VYY1 191 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 BBS12Q6ZW61 710 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 BTLAQ7Z6A9 289 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CPNE8Q86YQ8 564 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RNASE11Q8TAA1 199 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SHKBP1Q8TBC3 707 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NAT9Q9BTE0 207 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 OR51B5Q9H339 312 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CHMP1AQ9HD42 196 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MAPRE3Q9UPY8 281 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NOSIPQ9Y314 301 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 DCCP43146 1447 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TCRBV5S4A2TA0A5A2 114 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CPNE6O95741 557 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TP53P04637 393 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CSF1RP07333 972 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM45BPQ6NSW5 357 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TMPRSS11AQ6ZMR5 421 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM71AQ8IYT1 594 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 LGI2Q8N0V4 545 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SETD6Q8TBK2 473 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ZUFSPQ96AP4 578 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SGK3Q96BR1 496 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms