RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ACOX1Q15067 660 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 IRF4Q15306 451 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 LLGL1Q15334 1064 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 CCDC181Q5TID7 509 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
MRPL55-233ENST00000495899 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ATL2Q8NHH9 583 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 BTN2A2Q8WVV5 523 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 HTR3CQ8WXA8 447 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 TADA1Q96BN2 335 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 LYSMD1Q96S90 227 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 GLOD4Q9HC38 313 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 DNAJC28Q9NX36 388 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 TRHDEQ9UKU6 1024 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 CHKBQ9Y259 395 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 BTBD3Q9Y2F9 522 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ANKRD66B4E2M5 251 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 H3BM21 787 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 GM2AP17900 193 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 LHCGRP22888 699 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 PTPN3P26045 913 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 PMLP29590 882 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 TRIM23P36406 574 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 NOMO1Q15155 1222 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 CNGA3Q16281 694 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
MRPL55-233ENST00000495899 PNCKQ6P2M8 343 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 MACC1Q6ZN28 852 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 NLRP8Q86W28 1048 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 SLC25A45Q8N413 288 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 TBATAQ96M53 351 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.43
MRPL55-233ENST00000495899 APOOQ9BUR5 198 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 GUCA1BQ9UMX6 200 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
MRPL55-233ENST00000495899 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
MRPL55-233ENST00000495899 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 H7C0C1 242 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 PDE2AO00408 941 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 SCAMP1O15126 338 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 PIAS2O75928 621 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 LDOC1O95751 146 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 FTCDO95954 541 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 EPOP01588 193 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 ALPIP09923 528 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CDK4P11802 303 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 JUNDP17535 347 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CTPS1P17812 591 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 KELP23276 732 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 TEAD1P28347 426 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 ATP5OP48047 213 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 BLKP51451 505 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CCZ1BP86790 482 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CCZ1P86791 482 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 SHC2P98077 582 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 PTSQ03393 145 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 DPTQ07507 201 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 EIF2B5Q13144 721 aaKnown RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 NFATC4Q14934 902 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CCDC70Q6NSX1 233 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 B4GALNT4Q76KP1 1039 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 PID1Q7Z2X4 250 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 HSD11B1LQ7Z5J1 315 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 TECPR1Q7Z6L1 1165 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 LPCAT1Q8NF37 534 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 ACTL9Q8TC94 416 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 HAUS1Q96CS2 278 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 NUS1Q96E22 293 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 DTD2Q96FN9 168 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 TRIB3Q96RU7 358 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 SRPK1Q96SB4 655 aaKnown RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 RBM15Q96T37 977 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 HERPUD2Q9BSE4 406 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 MLPHQ9BV36 600 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-233ENST00000495899 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
MRPL55-233ENST00000495899 ASCC3Q8N3C0 2202 aaKnown RBP12.36□□□□□ -0.43
MRPL55-233ENST00000495899 RGSL1A5PLK6 1076 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
MRPL55-233ENST00000495899 TPP1O14773 563 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 SDC3O75056 442 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 STK10O94804 968 aaKnown RBP12.36□□□□□ -0.43
MRPL55-233ENST00000495899 DKK1O94907 266 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 PCCBP05166 539 aa12.36□□□□□ -0.43
MRPL55-233ENST00000495899 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
MRPL55-233ENST00000495899 C1SP09871 688 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms