RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 TTLL2Q9BWV7 592 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 MRPL1Q9BYD6 325 aaKnown RBP15.36■□□□□ 0.05
CALD1-222ENST00000495522 POPDC3Q9HBV1 291 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 CATSPERZQ9NTU4 200 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 DNMT3LQ9UJW3 386 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 HTTP42858 3142 aa15.36■□□□□ 0.05
CALD1-222ENST00000495522 A0A0D9SEW6 157 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 TRPA1O75762 1119 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SUPT7LO94864 414 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 UPP2O95045 317 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 LYNP07948 512 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 UBTFL6P0CB48 400 aaPredicted RBP15.35■□□□□ 0.05
CALD1-222ENST00000495522 HOXD9P28356 352 aaPredicted RBP15.35■□□□□ 0.05
CALD1-222ENST00000495522 DPP6P42658 865 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SUOXP51687 545 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 HERVK_113P63132 956 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 GNA12Q03113 381 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 STX5Q13190 355 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 PTPRCAPQ14761 206 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 ANKS3Q6ZW76 656 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 PQLC1Q8N2U9 271 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 DBF4BQ8NFT6 615 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 OR52K2Q8NGK3 314 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 OR13C4Q8NGS5 318 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 PTERQ96BW5 349 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 TMA16Q96EY4 203 aaKnown RBP15.35■□□□□ 0.05
CALD1-222ENST00000495522 ERVK-6Q9BXR3 956 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 TRPC7Q9HCX4 862 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SEPT3Q9UH03 358 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 ARVCFO00192 962 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 NBNO60934 754 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 GPC4O75487 556 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 ATF6P18850 670 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SLC6A4P31645 630 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 ATP5C1P36542 298 aaKnown RBP15.35■□□□□ 0.05
CALD1-222ENST00000495522 STC1P52823 247 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 AQP4P55087 323 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SEMA3AQ14563 771 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 IL31Q6EBC2 164 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 OR7D4Q8NG98 312 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SH3RF2Q8TEC5 729 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 TRIB3Q96RU7 358 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 TTPALQ9BTX7 342 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 SLC24A3Q9HC58 644 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 PDP2Q9P2J9 529 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
CALD1-222ENST00000495522 MTF2Q9Y483 593 aaPredicted RBP15.35■□□□□ 0.05
CALD1-222ENST00000495522 NT5C1B-RDH14C9J2C7 533 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 PSMD12O00232 456 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 UBFD1O14562 309 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 PIRTP0C851 137 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 UQCRBP14927 111 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 HOXD10P28358 340 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 PMLP29590 882 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 SLC11A2P49281 568 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 CDH4P55283 916 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 TIAL1Q01085 375 aaKnown RBP eCLIP15.34■□□□□ 0.05
CALD1-222ENST00000495522 FASTKQ14296 549 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 UNC50Q53HI1 259 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 OGFRL1Q5TC84 451 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 DLG3Q92796 817 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 AARSD1Q9BTE6 412 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 CINPQ9BW66 212 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 POLR3BQ9NW08 1133 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 UBA2Q9UBT2 640 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 ZFP37Q9Y6Q3 630 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 STX16-NPEPL1H3BU86 382 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 BCAS2O75934 225 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 CRTAMO95727 393 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 GALTP07902 379 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 ZNF37AP17032 561 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 ALDH1A3P47895 512 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 RPL26P61254 145 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 MRPS22P82650 360 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 PTK2BQ14289 1009 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 PPP1R3AQ16821 1122 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 TYSND1Q2T9J0 566 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 GRAMD1BQ3KR37 738 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 CLEC6AQ6EIG7 209 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 RAB44Q7Z6P3 723 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 RYBPQ8N488 228 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 BHLHE22Q8NFJ8 381 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 HMGCLL1Q8TB92 370 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 ASB2Q96Q27 587 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 PSKH2Q96QS6 385 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 TMEM175Q9BSA9 504 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 NACA2Q9H009 215 aa15.34■□□□□ 0.05
CALD1-222ENST00000495522 INTS10Q9NVR2 710 aaKnown RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 NLE1Q9NVX2 485 aaPredicted RBP15.34■□□□□ 0.05
CALD1-222ENST00000495522 CHD5Q8TDI0 1954 aa15.33■□□□□ 0.05
CALD1-222ENST00000495522 TRIM38O00635 465 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 HOXA2O43364 376 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 OXCT1P55809 520 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 PSME3P61289 254 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 MS4A2Q01362 244 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 PDAP1Q13442 181 aaKnown RBP15.33■□□□□ 0.04
CALD1-222ENST00000495522 MED21Q13503 144 aa15.33■□□□□ 0.04
CALD1-222ENST00000495522 RBBP5Q15291 538 aaKnown RBP15.33■□□□□ 0.04
CALD1-222ENST00000495522 MMEL1Q495T6 779 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms