RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
HDAC6-235ENST00000495515 FGL2Q14314 439 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 PLA2G2CQ5R387 149 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 IQCHQ86VS3 1027 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 NRSN1Q8IZ57 195 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 CBARPQ8N350 705 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-235ENST00000495515 GPR161Q8N6U8 529 aaKnown RBP17.11■□□□□ 0.33
HDAC6-235ENST00000495515 DNAAF3Q8N9W5 541 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 MFSD2AQ8NA29 543 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 BLOC1S5Q8TDH9 187 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 NUS1Q96E22 293 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 SLC6A18Q96N87 628 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 SMIM14Q96QK8 99 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
HDAC6-235ENST00000495515 CDH19Q9H159 772 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 SLC6A14Q9UN76 642 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 COQ6Q9Y2Z9 468 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 THADAQ6YHU6 1953 aa17.11■□□□□ 0.33
HDAC6-235ENST00000495515 TOR1BO14657 336 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 USP12O75317 370 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 ZNF806P0C7X5 589 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 PIRTP0C851 137 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 ADCY8P40145 1251 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 C21orf59P57076 290 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 PDE1BQ01064 536 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 PTSQ03393 145 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 CDH17Q12864 832 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 PTK6Q13882 451 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 PTPRRQ15256 657 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 CDKN3Q16667 212 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 TRIM61Q5EBN2 209 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 SLC23A3Q6PIS1 610 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 LYSMD3Q7Z3D4 306 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 ZNF572Q7Z3I7 529 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-235ENST00000495515 GLT6D1Q7Z4J2 308 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 MAATS1Q7Z4T9 603 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 HSD11B1LQ7Z5J1 315 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 CENPTQ96BT3 561 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 DTD2Q96FN9 168 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 KRT12Q99456 494 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 KLF6Q99612 283 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-235ENST00000495515 MYOCQ99972 504 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 FZD3Q9NPG1 666 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 SHOC2Q9UQ13 582 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 NEU2Q9Y3R4 380 aa17.1■□□□□ 0.33
HDAC6-235ENST00000495515 SPAG17Q6Q759 2223 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 C2orf81A6NN90 581 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 A6NNZ2 444 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 VILLO15195 856 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 CRTAMO95727 393 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 PYGLP06737 847 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 SYPP08247 313 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 C1SP09871 688 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 TPSB2P20231 275 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 HMGCLP35914 325 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ETV3P41162 512 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 RABIFP47224 123 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 SPEM2Q0P670 501 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 LAMB3Q13751 1172 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 CSRP2Q16527 193 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 WSCD2Q2TBF2 565 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 DENND5AQ6IQ26 1287 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 KYAT3Q6YP21 454 aaKnown RBP17.09■□□□□ 0.33
HDAC6-235ENST00000495515 Q6ZVL8 140 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ASCL5Q7RTU5 278 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 TMC3Q7Z5M5 1100 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 TECPR1Q7Z6L1 1165 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 PCGF5Q86SE9 256 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 DCP2Q8IU60 420 aaKnown RBP17.09■□□□□ 0.33
HDAC6-235ENST00000495515 TP53I13Q8NBR0 393 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-235ENST00000495515 BRSK1Q8TDC3 778 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 KLHDC7BQ96G42 594 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ZDHHC5Q9C0B5 715 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 SEMA4GQ9NTN9 838 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 PKP3Q9Y446 797 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 SPO11Q9Y5K1 396 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 MRFAP1Q9Y605 127 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 ANKRD36A6QL64 1941 aa17.09■□□□□ 0.33
HDAC6-235ENST00000495515 NDC80O14777 642 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 RAD51BO15315 384 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 PPFIA2O75334 1257 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 SLC4A1P02730 911 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 DEKP35659 375 aaKnown RBP17.08■□□□□ 0.32
HDAC6-235ENST00000495515 PTGIRP43119 386 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 SPINT3P49223 89 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 CSNK1EP49674 416 aaKnown RBP17.08■□□□□ 0.32
HDAC6-235ENST00000495515 YPEL5P62699 121 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 DPTQ07507 201 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 C2orf54Q08AI8 447 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 MTM1Q13496 603 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 OLIG2Q13516 323 aa17.08■□□□□ 0.32
HDAC6-235ENST00000495515 IRF4Q15306 451 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms