RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SLC7A8Q9UHI5 535 aa10.41□□□□□ -0.74
SAMM50-206ENST00000494795 TAGLN3Q9UI15 199 aa10.41□□□□□ -0.74
SAMM50-206ENST00000494795 VPS51Q9UID3 782 aa10.41□□□□□ -0.74
SAMM50-206ENST00000494795 VPS28Q9UK41 221 aa10.41□□□□□ -0.74
SAMM50-206ENST00000494795 CCL16O15467 120 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ATP5HO75947 161 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 FGF18O76093 207 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 URODP06132 367 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 TPBGLP0DKB5 382 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ALOX15P16050 662 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 SLC12A2P55011 1212 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 FOXA1P55317 472 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 MXRA7P84157 204 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 RAB33AQ14088 237 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CYHR1Q6ZMK1 362 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 GLT6D1Q7Z4J2 308 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 DCBLD1Q8N8Z6 715 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CCDC124Q96CT7 223 aaKnown RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 PANX3Q96QZ0 392 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 TBC1D30Q9Y2I9 924 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ASB1Q9Y576 335 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 PCDHB9Q9Y5E1 797 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 A0A1B0GVM2 712 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 TCAF2A6NFQ2 919 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NCF1BA6NI72 391 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NCF1CA8MVU1 366 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 C9JVG2 144 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 UBXN8O00124 270 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CLDN11O75508 207 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 WISP3O95389 354 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NCF1P14598 390 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CD70P32970 193 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ZNF140P52738 457 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ATXN3P54252 364 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 EPHB1P54762 984 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 PRMT2P55345 433 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NSUN2Q08J23 767 aaKnown RBP eCLIP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 SMARCB1Q12824 385 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NXNQ6DKJ4 435 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ZSWIM9Q86XI8 627 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CCDC117Q8IWD4 279 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 RNF148Q8N7C7 305 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 KLHL23Q8NBE8 558 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 HIPK4Q8NE63 616 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 OR4L1Q8NH43 312 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 BRSK1Q8TDC3 778 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 PTCD2Q8WV60 388 aaKnown RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 MCUR1Q96AQ8 359 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 ALG14Q96F25 216 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 FEM1CQ96JP0 617 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 TOX2Q96NM4 488 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 RAB3IPQ96QF0 476 aaPredicted RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 KCNA7Q96RP8 456 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 RANBP9Q96S59 729 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 PRKD2Q9BZL6 878 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 MRPL46Q9H2W6 279 aaKnown RBP10.4□□□□□ -0.74
SAMM50-206ENST00000494795 GTSE1Q9NYZ3 720 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 SPG21Q9NZD8 308 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 NCKIPSDQ9NZQ3 722 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 LHX3Q9UBR4 397 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 OR51B4Q9Y5P0 310 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.74
SAMM50-206ENST00000494795 CEP290O15078 2479 aa10.4□□□□□ -0.75
SAMM50-206ENST00000494795 A0A088AWK7 358 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 STX16-NPEPL1H3BU86 382 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 SLC7A4O43246 635 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 LILRB3O75022 631 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 NIPSNAP2O75323 286 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 NDST3O95803 873 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 GLP2RO95838 553 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ELF1P32519 619 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 HADHAP40939 763 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RPL14P50914 215 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ECT2LQ008S8 904 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 POU4F1Q01851 419 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TNK2Q07912 1038 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 UGP2Q16851 508 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CFAP157Q5JU67 520 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 PAQR3Q6TCH7 311 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ZNF333Q96JL9 665 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ILKAPQ9H0C8 392 aaPredicted RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 FBRSL1Q9HCM7 1045 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 DNAJC28Q9NX36 388 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 FNIP2Q9P278 1114 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CFAP97Q9P2B7 532 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 SEPT3Q9UH03 358 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 INTS6Q9UL03 887 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CKMP06732 381 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 SULT2A1Q06520 285 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RFLNAQ6ZTI6 216 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ULK2Q8IYT8 1036 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 GIMAP7Q8NHV1 300 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 FATE1Q969F0 183 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TMA16Q96EY4 203 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 C3orf30Q96M34 536 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms