RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZNF470Q6ECI4 717 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 IGFN1Q86VF2 1251 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 DDIASQ8IXT1 998 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 PHF21BQ96EK2 531 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 CAMKK2Q96RR4 588 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 YIPF2Q9BWQ6 316 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 GBF1Q92538 1859 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ASPDHA6ND91 283 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 NR5A2O00482 541 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 GPC4O75487 556 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 MTHFD1P11586 935 aaKnown RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 PSMA4P25789 261 aaKnown RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 HOXD12P35452 270 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ZFP36L2P47974 494 aaKnown RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 AIF1P55008 147 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 TRAF2Q12933 501 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 BNIP2Q12982 314 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 INPP5AQ14642 412 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 NR1D2Q14995 579 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 PDZD4Q76G19 769 aaPredicted RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 BTLAQ7Z6A9 289 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 LINC00523Q86TU6 105 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 KCTD13Q8WZ19 329 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 L3HYPDHQ96EM0 354 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 QTRT2Q9H974 415 aaKnown RBP15.39■□□□□ 0.05
SDF4-207ENST00000494748 GDAP2Q9NXN4 497 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 ERAP1Q9NZ08 941 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 STAP1Q9ULZ2 295 aa15.39■□□□□ 0.05
SDF4-207ENST00000494748 POLR2AP24928 1970 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 RNF103-CHMP3A0A140T963 221 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 TMEM247A6NEH6 219 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 ELK4P28324 431 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 GRB7Q14451 532 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 UNC50Q53HI1 259 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 ZNF678Q5SXM1 525 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 ARTNQ5T4W7 220 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 C16orf87Q6PH81 154 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 ZNF773Q6PK81 442 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CLEC20AQ6ZU45 233 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CCDC117Q8IWD4 279 aaPredicted RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 DHRSXQ8N5I4 330 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 TMEM125Q96AQ2 219 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 DCPSQ96C86 337 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 YTHDF1Q9BYJ9 559 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 FBXO5Q9UKT4 447 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 DNAJC15Q9Y5T4 150 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 MBL2P11226 248 aaPredicted RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 CCNA2P20248 432 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 IMPDH1P20839 514 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 SHMT2P34897 504 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CHRNA4P43681 627 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 RPS9P46781 194 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 PLCL1Q15111 1095 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CCNYL2Q5T2Q4 361 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 GALNT18Q6P9A2 607 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 PTRH1Q86Y79 214 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 PCYOX1LQ8NBM8 494 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CCDC126Q96EE4 140 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CELF6Q96J87 481 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 GPN2Q9H9Y4 310 aaPredicted RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 C8orf4Q9NR00 106 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 HTR3EA5X5Y0 456 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 UNCXA6NJT0 531 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 YJEFN3A6XGL0 299 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 AP3B1O00203 1094 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 PPP6CO00743 305 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 MYL3P08590 195 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CDH3P22223 829 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 IL10P22301 178 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 BDNFP23560 247 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 SH3BP2P78314 561 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 FAM83EQ2M2I3 478 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 FBXO47Q5MNV8 452 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 ZNF362Q5T0B9 420 aaPredicted RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 KIAA0319Q5VV43 1072 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 EGFLAMQ63HQ2 1017 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 CTU1Q7Z7A3 348 aaKnown RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 RNF135Q8IUD6 432 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 MICALL2Q8IY33 904 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 SGCDQ92629 289 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 LRRC58Q96CX6 371 aa15.38■□□□□ 0.05
SDF4-207ENST00000494748 POLR3BQ9NW08 1133 aaPredicted RBP15.38■□□□□ 0.05
SDF4-207ENST00000494748 GPIP06744 558 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 IDUAP35475 653 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 MTA1Q13330 715 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 BCL2A1Q16548 175 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 PRMT9Q6P2P2 845 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 BHLHA9Q7RTU4 235 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 SMG8Q8ND04 991 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 FKBP10Q96AY3 582 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 TRIM15Q9C019 465 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 TUBB1Q9H4B7 451 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 FANCEQ9HB96 536 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 DNMT3BQ9UBC3 853 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 DNAJC25-GNG10A0A024R161 153 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms