RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CATSPERZQ9NTU4 200 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PDP2Q9P2J9 529 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 BCAP29Q9UHQ4 241 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-209ENST00000494623 SLC38A8A6NNN8 435 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 E7ENX8 843 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 UBXN8O00124 270 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-209ENST00000494623 FDXRP22570 491 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 SCNN1BP51168 640 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 XIAPP98170 497 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 FOLH1Q04609 750 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 RING1Q06587 406 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 TNK2Q07912 1038 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 SQLEQ14534 574 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 PFKFB4Q16877 469 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 GEN1Q17RS7 908 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-209ENST00000494623 FOXB2Q5VYV0 432 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 ARMC3Q5W041 872 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 FUT10Q6P4F1 479 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 PAOXQ6QHF9 649 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-209ENST00000494623 PTGR2Q8N8N7 351 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-209ENST00000494623 RMDN1Q96DB5 314 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 SMIM14Q96QK8 99 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 STARD7Q9NQZ5 370 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
CHMP3-209ENST00000494623 FBP2O00757 339 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 BCAS2O75934 225 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 HSPA1AP0DMV8 641 aaKnown RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 HSPA1BP0DMV9 641 aaKnown RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 FMO4P31512 558 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 NME5P56597 212 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 RPS24P62847 133 aaKnown RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 SH3BP2P78314 561 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 GNA12Q03113 381 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 OR4D1Q15615 310 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 TMEM173Q86WV6 379 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-209ENST00000494623 OR9I1Q8NGQ6 314 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 CDKN2AIPNLQ96HQ2 116 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 SPATA17Q96L03 361 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 C3orf30Q96M34 536 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 CASD1Q96PB1 797 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 TSC22D3Q99576 134 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 PCDHAC1Q9H158 963 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 PDFQ9HBH1 243 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 LRFN2Q9ULH4 789 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 FAM50BQ9Y247 325 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 PCDHGA7Q9Y5G6 932 aa11.21□□□□□ -0.62
CHMP3-209ENST00000494623 ACOT8O14734 319 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 PEX1O43933 1283 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ACSL4O60488 711 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 EPOP01588 193 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 SNRPB2P08579 225 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ATP5C1P36542 298 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 SLC26A3P40879 764 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 RGRP47804 291 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 HERVK_113P63132 956 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 SP3Q02447 781 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ACVR1Q04771 509 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 FBXO48Q5FWF7 155 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 REP15Q6BDI9 236 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 LRRC8DQ7L1W4 858 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 DENND1CQ8IV53 801 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 BBS5Q8N3I7 341 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 L3HYPDHQ96EM0 354 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 DCUN1D1Q96GG9 259 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 KLHL32Q96NJ5 620 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 PKP2Q99959 881 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ERVK-6Q9BXR3 956 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 CACNA2D2Q9NY47 1150 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 UTP6Q9NYH9 597 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ASB3Q9Y575 518 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 SPO11Q9Y5K1 396 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 VWA8A3KMH1 1905 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 A0A1W2PQ45 241 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 A0A1W2PQY0 241 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 H3BMM5 538 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 TRIM38O00635 465 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 NBNO60934 754 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 GJB5O95377 273 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 NDST3O95803 873 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 GFAPP14136 432 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 RPL17P18621 184 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ATF6P18850 670 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 LRP8Q14114 963 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 PDK3Q15120 406 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ZFP1Q6P2D0 407 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms