RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 SSH2Q76I76 1423 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 DENND3A2RUS2 1198 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 TEX22C9J3V5 150 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 WNT9BO14905 357 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 GUCY1B2O75343 617 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PCNAP12004 261 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 ITGAXP20702 1163 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
CD46-217ENST00000493796 PGM1P36871 562 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 CCT5P48643 541 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 CLDN2P57739 230 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 ERVFC1-1P60608 527 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 DHX34Q14147 1143 aaKnown RBP3.81□□□□□ -1.8
CD46-217ENST00000493796 ARHGEF6Q15052 776 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 TAF12Q16514 161 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 NFIL3Q16649 462 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 SERTAD4-AS1Q5TG53 156 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 FAM69BQ5VUD6 431 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 CYP26C1Q6V0L0 522 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 LRRC8DQ7L1W4 858 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 SHFQ7M4L6 423 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 KIAA2013Q8IYS2 634 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PGBD5Q8N414 524 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PARP16Q8N5Y8 322 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PLD5Q8N7P1 536 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 ADGRG7Q96K78 797 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 UBXN10Q96LJ8 280 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 MMTAG2Q9BU76 263 aaKnown RBP3.81□□□□□ -1.8
CD46-217ENST00000493796 SNTG1Q9NSN8 517 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 BABAM1Q9NWV8 329 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 KIAA1456Q9P272 454 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 CNOT7Q9UIV1 285 aaKnown RBP3.81□□□□□ -1.8
CD46-217ENST00000493796 NFS1Q9Y697 457 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 COL18A1P39060 1754 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 MON2Q7Z3U7 1717 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 ABCA3Q99758 1704 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PEAK1Q9H792 1746 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 PIK3C2AO00443 1686 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 NHSL1Q5SYE7 1610 aa3.81□□□□□ -1.8
CD46-217ENST00000493796 MED1Q15648 1581 aaPredicted RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 TONSLQ96HA7 1378 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 USP47Q96K76 1375 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 KIF7Q2M1P5 1343 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 CLSPNQ9HAW4 1339 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 LOC102724159A0A0B4J2E5 919 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 CPED1A4D0V7 1026 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 HSPA12AO43301 675 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 KLK8O60259 260 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 NDUFB4O95168 129 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 URODP06132 367 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 IGHV4-30-4P0DP06 118 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 EDN2P20800 178 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 SSTR2P30874 369 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 PIGAP37287 484 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 PEX5P50542 639 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 EFNB1P98172 346 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 DDR1Q08345 913 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 TDGQ13569 410 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 PWP2Q15269 919 aaKnown RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 SF3B4Q15427 424 aaKnown RBP eCLIP3.8□□□□□ -1.82e-7■■■□□ 16.8
CD46-217ENST00000493796 SETMARQ53H47 684 aaPredicted RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 TADA2BQ86TJ2 420 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 GPAT4Q86UL3 456 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 NR2C2APQ86WQ0 139 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 TMTC1Q8IUR5 882 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 ERGIC1Q969X5 290 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 SCMH1Q96GD3 660 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 ZC3HAV1LQ96H79 300 aaKnown RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 IGSF21Q96ID5 467 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 MAELQ96JY0 434 aaKnown RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 CDK19Q9BWU1 502 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 GPR63Q9BZJ6 419 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 INTS2Q9H0H0 1204 aaKnown RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 TTYH1Q9H313 450 aaPredicted RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 SMYD2Q9NRG4 433 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 BEX4Q9NWD9 120 aaPredicted RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 CARD8Q9Y2G2 431 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD46-217ENST00000493796 NFE2L3Q9Y4A8 694 aa3.8□□□□□ -1.8
CD46-217ENST00000493796 COL16A1Q07092 1604 aaPredicted RBP3.8□□□□□ -1.8
CD46-217ENST00000493796 C1orf167Q5SNV9 1468 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 PXDNQ92626 1479 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 PTCH1Q13635 1447 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 ROCK2O75116 1388 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 NPIPB11E5RHQ5 1161 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE7O76087 117 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 HEXAP06865 529 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 SNRNP70P08621 437 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 CNTFP26441 200 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 CHATP28329 748 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 CDH15P55291 814 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 TLE2Q04725 743 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 DLG1Q12959 904 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms