RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 GLMNQ92990 594 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 RNF145Q96MT1 663 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
HDAC4-210ENST00000493582 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 INTS10Q9NVR2 710 aaKnown RBP11.72□□□□□ -0.53
HDAC4-210ENST00000493582 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PTGDR2Q9Y5Y4 395 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 SLX4Q8IY92 1834 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 FXYD1O00168 92 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 DPYSL4O14531 572 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 TOMM70O94826 608 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PCNAP12004 261 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 CBX2Q14781 532 aaPredicted RBP11.72□□□□□ -0.53
HDAC4-210ENST00000493582 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
HDAC4-210ENST00000493582 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 HEXDCQ8WVB3 486 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 RHOJQ9H4E5 214 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 CHST12Q9NRB3 414 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 GMIPQ9P107 970 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 ABCD2Q9UBJ2 740 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PCDHGA11Q9Y5H2 935 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 DOCK5Q9H7D0 1870 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 PCNTO95613 3336 aa11.72□□□□□ -0.53
HDAC4-210ENST00000493582 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 H0YAE9 185 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 HUS1O60921 280 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 KCNK2O95069 426 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 DLGAP3O95886 979 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 CDH1P12830 882 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 HSD17B1P14061 328 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 GPX3P22352 226 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ARL4AP40617 200 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 STX1BP61266 288 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 SP2Q02086 613 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ADCK1Q86TW2 530 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 PSTKQ8IV42 348 aaKnown RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 CLEC4FQ8N1N0 589 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 TXNDC15Q96J42 360 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 C17orf80Q9BSJ5 609 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 MRIQ9BWK5 157 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 CHID1Q9BWS9 393 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ITM2CQ9NQX7 267 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ANAPC2Q9UJX6 822 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 SYNJ2BP-COX16A0A087WUM0 186 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 HACD1B0YJ81 288 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ANGPT2O15123 496 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 RFPL2O75678 378 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 GPIP06744 558 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 FCGR1AP12314 374 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ARSFP54793 590 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 TMC5Q6UXY8 1006 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 LARP4Q71RC2 724 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 SLC26A9Q7LBE3 791 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 PAGE2Q7Z2X7 111 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 STK32CQ86UX6 486 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 HOPXQ9BPY8 73 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-210ENST00000493582 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 RHOBTB2Q9BYZ6 727 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 EXD2Q9NVH0 621 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 COX16Q9P0S2 106 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 GPSM3Q9Y4H4 160 aa11.71□□□□□ -0.53
HDAC4-210ENST00000493582 WDR81Q562E7 1941 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 DYTNA2CJ06 578 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 UBFD1O14562 309 aaKnown RBP11.71□□□□□ -0.54
HDAC4-210ENST00000493582 B4GALT5O43286 388 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 KPNA6O60684 536 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 NDUFS2O75306 463 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 STMN1P16949 149 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 ARL1P40616 181 aaPredicted RBP11.71□□□□□ -0.54
HDAC4-210ENST00000493582 RAB10P61026 200 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 BNIP2Q12982 314 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 CSHL1Q14406 222 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 HIST2H2ACQ16777 129 aaPredicted RBP11.71□□□□□ -0.54
HDAC4-210ENST00000493582 SUPT20HL1Q3ZLR7 823 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 STRIP1Q5VSL9 837 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 LCLAT1Q6UWP7 414 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 RFPL4BQ6ZWI9 263 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 ZNF280CQ8ND82 737 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 OR6Q1Q8NGQ2 317 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 MUL1Q969V5 352 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 VPS33AQ96AX1 596 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 LRRC58Q96CX6 371 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 HPS4Q9NQG7 708 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.54
HDAC4-210ENST00000493582 PDE10AQ9Y233 779 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 CARD8Q9Y2G2 431 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 USP3Q9Y6I4 520 aa11.71□□□□□ -0.54
HDAC4-210ENST00000493582 TCRBV5S2A0A599 114 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms