RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 TCTN1Q2MV58 587 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 IL31Q6EBC2 164 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 CYHR1Q6ZMK1 362 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 SDCCAG8Q86SQ7 713 aaPredicted RBP18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 NPAS4Q8IUM7 802 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 BBS5Q8N3I7 341 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 GDPD5Q8WTR4 605 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 PPP2R3CQ969Q6 453 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 CDKN2AIPNLQ96HQ2 116 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 NPAS2Q99743 824 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 TMEM175Q9BSA9 504 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 ERVK-6Q9BXR3 956 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 VCX3BQ9H321 246 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 POPDC3Q9HBV1 291 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 SEPT3Q9UH03 358 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 SCOCQ9UIL1 159 aa18.89■□□□□ 0.61
TSC22D4-205ENST00000493217 CFLARO15519 480 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 GJB5O95377 273 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 ARSAP15289 507 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 PEX2P28328 305 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 SLC11A2P49281 568 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 RPS24P62847 133 aaKnown RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 XIAPP98170 497 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 PPP1R3AQ16821 1122 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 TYSND1Q2T9J0 566 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 UNC50Q53HI1 259 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 SFT2D3Q587I9 215 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 UTP6Q9NYH9 597 aaKnown RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 PSMD13Q9UNM6 376 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 CCDC189A1A4V9 331 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 UBDO15205 165 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 INHAP05111 366 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 RGRP47804 291 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 PKNOX1P55347 436 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 MS4A2Q01362 244 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 BFSP2Q13515 415 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 FLOT2Q14254 428 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 SQLEQ14534 574 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 OR52E8Q6IFG1 317 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 SLC8B1Q6J4K2 584 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 GK5Q6ZS86 529 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 SEPT8Q92599 483 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 USP13Q92995 863 aaPredicted RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 AARSD1Q9BTE6 412 aaKnown RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 MRPL9Q9BYD2 267 aaKnown RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 EBF3Q9H4W6 596 aa18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 NLE1Q9NVX2 485 aaPredicted RBP18.88■□□□□ 0.61
TSC22D4-205ENST00000493217 STX16-NPEPL1H3BU86 382 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 KDELR3O43731 214 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 MTHFD2P13995 350 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 CR2P20023 1033 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 ME2P23368 584 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 MSX2P35548 267 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 PTK2BQ14289 1009 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 CLEC6AQ6EIG7 209 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 KLHDC10Q6PID8 442 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 FAM126BQ8IXS8 530 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 RHEBL1Q8TAI7 183 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 ZNF512Q96ME7 567 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 PRICKLE1Q96MT3 831 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 SPON2Q9BUD6 331 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 CINPQ9BW66 212 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 MRPL1Q9BYD6 325 aaKnown RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 UBA2Q9UBT2 640 aaPredicted RBP18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 SPO11Q9Y5K1 396 aa18.87■□□□□ 0.61
TSC22D4-205ENST00000493217 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 ZNF840PA6NDX5 716 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TBKBP1A7MCY6 615 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 HOXA2O43364 376 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 KIF1CO43896 1103 aaKnown RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PEX1O43933 1283 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 SMIM24O75264 130 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 CLDN11O75508 207 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 CRTAMO95727 393 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PRSS56P0CW18 603 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TSPAN8P19075 237 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PMLP29590 882 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 SCNN1BP51168 640 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 ZNF140P52738 457 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 STX5Q13190 355 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TRIP10Q15642 601 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 UGT3A2Q3SY77 523 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 LARP4Q71RC2 724 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 DENND1CQ8IV53 801 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 APLFQ8IW19 511 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TMA16Q96EY4 203 aaKnown RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 NACA2Q9H009 215 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TRPC7Q9HCX4 862 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 INTS10Q9NVR2 710 aaKnown RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 C6orf203Q9P0P8 240 aaPredicted RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 SUFUQ9UMX1 484 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 H3BMM5 538 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 INSIG1O15503 277 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 COCHO43405 550 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 PRLP01236 227 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 KLKB1P03952 638 aa18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 TUFMP49411 452 aaKnown RBP18.86■□□□□ 0.61
TSC22D4-205ENST00000493217 OXCT1P55809 520 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms