RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 C14orf28Q4W4Y0 310 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CERCAMQ5T4B2 595 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CLEC14AQ86T13 490 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 TEX26Q8N6G2 289 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 KYQ8NBH2 561 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 SNRNP27Q8WVK2 155 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 OR1E3Q8WZA6 343 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 FATE1Q969F0 183 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 TEX101Q9BY14 249 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 GSDMCQ9BYG8 508 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 PCDH18Q9HCL0 1135 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 CYP4F12Q9HCS2 524 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 MOSPD1Q9UJG1 213 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 PCDHGA7Q9Y5G6 932 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL6A1-205ENST00000492851 IGSF10Q6WRI0 2623 aa12.47□□□□□ -0.41
COL6A1-205ENST00000492851 ATRXP46100 2492 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 A0A087X0T9 212 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PRSS38A1L453 326 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 A8MX80 341 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PLD2O14939 933 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PGLSO95336 258 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 RPLP0P05388 317 aaKnown RBP12.46□□□□□ -0.41
COL6A1-205ENST00000492851 KRT7P08729 469 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 FAM228BP0C875 321 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 ZNF30P17039 623 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 MX2P20592 715 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CCNCP24863 283 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PBX1P40424 430 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CCL7P80098 99 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 SKOR1P84550 965 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 SLC25A11Q02978 314 aaKnown RBP12.46□□□□□ -0.41
COL6A1-205ENST00000492851 ITKQ08881 620 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 ILF3Q12906 894 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CNGA3Q16281 694 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 RAB11FIP2Q7L804 512 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CCNJLQ8IV13 435 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 KCTD6Q8NC69 237 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 GPBAR1Q8TDU6 330 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 DTD2Q96FN9 168 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PDXPQ96GD0 296 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 PRR11Q96HE9 360 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-205ENST00000492851 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 TMEM168Q9H0V1 697 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 FGF22Q9HCT0 170 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 ETNK2Q9NVF9 386 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 UVRAGQ9P2Y5 699 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
COL6A1-205ENST00000492851 CELSR3Q9NYQ7 3312 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 SYCE3A1L190 88 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 D6RAR5 112 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 MATN3O15232 486 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 JMJD7P0C870 316 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 CCNB1P14635 433 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 GM2AP17900 193 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 IL4RP24394 825 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 GARSP41250 739 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 RPL26P61254 145 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 GALNT2Q10471 571 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 BIRC2Q13490 618 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 IFI16Q16666 785 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 SPECC1LQ69YQ0 1117 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 LUZP1Q86V48 1076 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 HEATR4Q86WZ0 1026 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 TP53INP2Q8IXH6 220 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 PGBD5Q8N414 524 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 TSGA13Q96PP4 275 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF670Q9BS34 389 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 LGR4Q9BXB1 951 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 B3GNT4Q9C0J1 378 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 CARS2Q9HA77 564 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 EPB41L5Q9HCM4 733 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 RPL26L1Q9UNX3 145 aaKnown RBP12.45□□□□□ -0.42
COL6A1-205ENST00000492851 MYLKQ15746 1914 aa12.45□□□□□ -0.42
COL6A1-205ENST00000492851 A0A1W2PQM1 296 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 RHPN2P1A8MT19 583 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms