RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ARHGEF7Q14155 803 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 STX1AQ16623 288 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 ZNF438Q7Z4V0 828 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SPRED1Q7Z699 444 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 B3GNT8Q7Z7M8 397 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 NLRP8Q86W28 1048 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 LRRC49Q8IUZ0 686 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 ARHGAP12Q8IWW6 846 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PLA2G15Q8NCC3 412 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SGF29Q96ES7 293 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PDXPQ96GD0 296 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 COQ10AQ96MF6 247 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 TEX101Q9BY14 249 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 GSDMCQ9BYG8 508 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 NAT10Q9H0A0 1025 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SP110Q9HB58 689 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 FGF22Q9HCT0 170 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 MRPL47Q9HD33 250 aaKnown RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PHPT1Q9NRX4 125 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-212ENST00000492407 AIPL1Q9NZN9 384 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SIRPGQ9P1W8 387 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PHTF1Q9UMS5 762 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 COQ6Q9Y2Z9 468 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PPIL1Q9Y3C6 166 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 LOXL2Q9Y4K0 774 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 COMMD10Q9Y6G5 202 aa9.15□□□□□ -0.94
HDAC3-212ENST00000492407 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.95
HDAC3-212ENST00000492407 ATMQ13315 3056 aa9.15□□□□□ -0.95
HDAC3-212ENST00000492407 COL27A1Q8IZC6 1860 aaPredicted RBP9.15□□□□□ -0.95
HDAC3-212ENST00000492407 PRSS38A1L453 326 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 EFSO43281 561 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CPNE6O95741 557 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 PYGLP06737 847 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CYP2A6P11509 494 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CCNB1P14635 433 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 GM2AP17900 193 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CR2P20023 1033 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CES1P23141 567 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 MIPP30301 263 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 PRKCIP41743 596 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 RGRP47804 291 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SCNN1BP51168 640 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 B4GALNT1Q00973 533 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 DPTQ07507 201 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 ILF3Q12906 894 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 DPYSQ14117 519 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 NCAPHQ15003 741 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 DPYSL2Q16555 572 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 ZSCAN23Q3MJ62 389 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SPECC1LQ69YQ0 1117 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 USP53Q70EK8 1073 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 PIM3Q86V86 326 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 DTX1Q86Y01 620 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SLITRK4Q8IW52 837 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 NDUFAF2Q8N183 169 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 ARFGAP1Q8N6T3 406 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 PAF1Q8N7H5 531 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 ZSCAN1Q8NBB4 408 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SCRN2Q96FV2 425 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 CELF6Q96J87 481 aaKnown RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 NUDCD1Q96RS6 583 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 KCTD15Q96SI1 283 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SNRNP25Q9BV90 132 aaKnown RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 DPEP2Q9H4A9 486 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SYNDIG1Q9H7V2 258 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 RNF215Q9Y6U7 377 aa9.14□□□□□ -0.95
HDAC3-212ENST00000492407 FLNBO75369 2602 aaKnown RBP9.14□□□□□ -0.95
HDAC3-212ENST00000492407 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CCDC66A2RUB6 948 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PMS2P1A4D2B8 440 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 H3BRJ5 948 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 DFFAO00273 331 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PPP1R12AO14974 1030 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 LRCH4O75427 683 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 HEXIM1O94992 359 aaKnown RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PEX11BO96011 259 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 FTLP02792 175 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 FGF1P05230 155 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CEACAM5P06731 702 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 IVLP07476 585 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 VIPR1P32241 457 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 SERPINB6P35237 376 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 ARL4AP40617 200 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CDH6P55285 790 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 LRP8Q14114 963 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 LY6DQ14210 128 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF235Q14590 738 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 ACOX1Q15067 660 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CA9Q16790 459 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PPP6R3Q5H9R7 873 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms