RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 HMX3A6NHT5 357 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 CRLF1O75462 422 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 NDUFB4O95168 129 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 SRD5A1P18405 259 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 SERPINF1P36955 418 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 RUNX2Q13950 521 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 ESCO2Q56NI9 601 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 ZC2HC1BQ5TFG8 222 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 PGBD2Q6P3X8 592 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.79
PHC3-213ENST00000491258 ADAD2Q8NCV1 583 aaKnown RBP3.87□□□□□ -1.79
PHC3-213ENST00000491258 LINS1Q8NG48 757 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 ZNF599Q96NL3 588 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 PYGO2Q9BRQ0 406 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 TAF1DQ9H5J8 278 aaPredicted RBP3.87□□□□□ -1.79
PHC3-213ENST00000491258 PLEKHA5Q9HAU0 1116 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 FAF1Q9UNN5 650 aaPredicted RBP3.87□□□□□ -1.79
PHC3-213ENST00000491258 PCDHGB5Q9Y5G0 923 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 PLXNC1O60486 1568 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
PHC3-213ENST00000491258 CAMSAP1Q5T5Y3 1602 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 ABCA6Q8N139 1617 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 KANK1Q14678 1352 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 FGD6Q6ZV73 1430 aa3.87□□□□□ -1.79
PHC3-213ENST00000491258 MED14O60244 1454 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 TIAM1Q13009 1591 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 A0A087WV62 115 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 MTA2O94776 668 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 TUBBP07437 444 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 WEE2P0C1S8 567 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 PDIA3P30101 505 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 HNF1BP35680 557 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 TMPOP42166 694 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 C1QTNF8P60827 252 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 TUBB4BP68371 445 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 GALNT1Q10472 559 aaPredicted RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 HLTFQ14527 1009 aaKnown RBP eCLIP3.86□□□□□ -1.79
PHC3-213ENST00000491258 SMAD1Q15797 465 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 SOWAHAQ2M3V2 549 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 ZNF484Q5JVG2 852 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 LCTLQ6UWM7 567 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 IL20RBQ6UXL0 311 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 GFRALQ6UXV0 394 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 B3GNT6Q6ZMB0 384 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 ANKRD13AQ8IZ07 590 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 LYG1Q8N1E2 194 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 SLC20A1Q8WUM9 679 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 RNFT2Q96EX2 444 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 CDCA5Q96FF9 252 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 RBM17Q96I25 401 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 C8orf48Q96LL4 319 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 FSD1Q9BTV5 496 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 TTC12Q9H892 705 aaPredicted RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 C17orf75Q9HAS0 396 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 FAM118AQ9NWS6 357 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 CISD1Q9NZ45 108 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 RIMS1Q86UR5 1692 aaKnown RBP3.86□□□□□ -1.79
PHC3-213ENST00000491258 DAPK1P53355 1430 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 ERBINQ96RT1 1412 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 ERVK-7P63135 1459 aa3.86□□□□□ -1.79
PHC3-213ENST00000491258 PREX2Q70Z35 1606 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ACKR2O00590 384 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 DHX16O60231 1041 aaKnown RBP3.85□□□□□ -1.79
PHC3-213ENST00000491258 TNNT1P13805 278 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ZNF8P17098 575 aaPredicted RBP3.85□□□□□ -1.79
PHC3-213ENST00000491258 NEDD9Q14511 834 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 LPAL2Q16609 132 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 KCNT1Q5JUK3 1230 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 CEACAM20Q6UY09 585 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 SH2D6Q7Z4S9 175 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 GTSCR1Q86UQ5 136 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 KMT5CQ86Y97 462 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 GJC3Q8NFK1 279 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 RND1Q92730 232 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ZC3HAV1LQ96H79 300 aaKnown RBP3.85□□□□□ -1.79
PHC3-213ENST00000491258 G6PC2Q9NQR9 355 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 TMEM94Q12767 1356 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ANKRD50Q9ULJ7 1429 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 ABCC3O15438 1527 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 KDM5DQ9BY66 1539 aa3.85□□□□□ -1.79
PHC3-213ENST00000491258 KIDINS220Q9ULH0 1771 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 HSPB2A8KAH6 182 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 ITGA2P17301 1181 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 GPTP24298 496 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 RYKP34925 604 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 GNL1P36915 607 aaPredicted RBP3.84□□□□□ -1.79
PHC3-213ENST00000491258 KRT72Q14CN4 511 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 HSPB2Q16082 182 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 SLC18A3Q16572 532 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 EDRF1Q3B7T1 1238 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 STXBP5Q5T5C0 1151 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 ZNF852Q6ZMS4 543 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 KCTD8Q6ZWB6 473 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 STXBP4Q6ZWJ1 553 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 PRSS45Q7RTY3 260 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 SPAG16Q8N0X2 631 aa3.84□□□□□ -1.79
PHC3-213ENST00000491258 OR6Y1Q8NGX8 325 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms