RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 MGAT1P26572 445 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 YBEYP58557 167 aaPredicted RBP22.86■■□□□ 1.25
USF3-203ENST00000491165 TMEM215Q68D42 235 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 MYLK4Q86YV6 388 aaPredicted RBP22.86■■□□□ 1.25
USF3-203ENST00000491165 SFTPA1Q8IWL2 248 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 ATPAF2Q8N5M1 289 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 UCMAQ8WVF2 138 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 FERMT1Q9BQL6 677 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 NAT9Q9BTE0 207 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 YIPF3Q9GZM5 350 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 MAGEH1Q9H213 219 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 BRD9Q9H8M2 597 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 IPO11Q9UI26 975 aaKnown RBP22.86■■□□□ 1.25
USF3-203ENST00000491165 SOX13Q9UN79 622 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 RAD54BQ9Y620 910 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 RNF103O00237 685 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 NARSO43776 548 aaKnown RBP22.85■■□□□ 1.25
USF3-203ENST00000491165 ANPEPP15144 967 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 KCNA4P22459 653 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 GJA4P35212 333 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 AP2B1P63010 937 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 TUBB3Q13509 450 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 C1orf146Q5VVC0 180 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 IL31Q6EBC2 164 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 ZNF354CQ86Y25 554 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 SPON2Q9BUD6 331 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 ACE2Q9BYF1 805 aaPredicted RBP22.85■■□□□ 1.25
USF3-203ENST00000491165 APOBEC2Q9Y235 224 aaKnown RBP22.85■■□□□ 1.25
USF3-203ENST00000491165 LOC730098B7Z3J9 87 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PPP1R12AO14974 1030 aaPredicted RBP22.85■■□□□ 1.25
USF3-203ENST00000491165 TULP3O75386 442 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 SERPINE1P05121 402 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 ITGA2BP08514 1039 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 MX2P20592 715 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PDE1BQ01064 536 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PCLAFQ15004 111 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 FUT11Q495W5 492 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PPP4R1Q8TF05 950 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 FAM96AQ9H5X1 160 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PDFQ9HBH1 243 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 GPAMQ9HCL2 828 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 ATP13A1Q9HD20 1204 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 PIH1D1Q9NWS0 290 aaKnown RBP22.85■■□□□ 1.25
USF3-203ENST00000491165 DLGAP2Q9P1A6 1054 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 F5P12259 2224 aa22.85■■□□□ 1.25
USF3-203ENST00000491165 ANTXRLA6NF34 631 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 ARHGAP42A6NI28 874 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 NCAM2O15394 837 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 KLHL2O95198 593 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 CD160O95971 181 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 CISD3P0C7P0 127 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 ARF5P84085 180 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 ZBTB17Q13105 803 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 GEN1Q17RS7 908 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 PLEKHG6Q3KR16 790 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 SCOCQ9UIL1 159 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 VPS28Q9UK41 221 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 CBX4O00257 560 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 GRK2P25098 689 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 CPOXP36551 454 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 PEX19P40855 299 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 OPRD1P41143 372 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 INSCQ1MX18 579 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 LINGO4Q6UY18 593 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 RASSF3Q86WH2 238 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 TSGA13Q96PP4 275 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 KIAA1522Q9P206 1035 aaPredicted RBP22.84■■□□□ 1.25
USF3-203ENST00000491165 TXNDC16Q9P2K2 825 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 PSAT1Q9Y617 370 aa22.84■■□□□ 1.25
USF3-203ENST00000491165 ZMPSTE24O75844 475 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 IRX1P78414 480 aaPredicted RBP22.83■■□□□ 1.25
USF3-203ENST00000491165 ADIPOR2Q86V24 386 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 KBTBD2Q8IY47 623 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 CPA6Q8N4T0 437 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 SYBUQ9NX95 663 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 NDE1Q9NXR1 346 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 SEPT10Q9P0V9 454 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 THEGQ9P2T0 379 aa22.83■■□□□ 1.25
USF3-203ENST00000491165 MEI4A8MW99 385 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 PROCP04070 461 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 CCNCP24863 283 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 CTSOP43234 321 aaPredicted RBP22.82■■□□□ 1.24
USF3-203ENST00000491165 PUS10Q3MIT2 529 aaKnown RBP22.82■■□□□ 1.24
USF3-203ENST00000491165 PITRM1Q5JRX3 1037 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 ZNF783Q6ZMS7 281 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 C10orf107Q8IVU9 208 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 FBRSL1Q9HCM7 1045 aaKnown RBP22.82■■□□□ 1.24
USF3-203ENST00000491165 DNAJC28Q9NX36 388 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 VPS51Q9UID3 782 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 PRAMEF11O60813 436 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 MT-CO1P00395 513 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 POLBP06746 335 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 PABPC1P11940 636 aaKnown RBP22.82■■□□□ 1.24
USF3-203ENST00000491165 PSMB4P28070 264 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 DGKGP49619 791 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 ZP2Q05996 745 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 SLC10A7Q0GE19 358 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 ITPRIPL2Q3MIP1 535 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 KIAA0907Q7Z7F0 614 aaPredicted RBP22.82■■□□□ 1.24
USF3-203ENST00000491165 PHTF2Q8N3S3 785 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms