RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PDFQ9HBH1 243 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 MRPL40Q9NQ50 206 aaKnown RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 TRNAU1APQ9NX07 287 aaKnown RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 RHPN2P1A8MT19 583 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 B4E171 279 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 RASA4BC9J798 803 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 AGRPO00253 132 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 RASA4O43374 803 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 BUB1BO60566 1050 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 CYP1A1P04798 512 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 FGF1P05230 155 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 THRAP10827 490 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 MYCLP1P12525 358 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 EPHB2P29323 1055 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 TSPAN7P41732 249 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 CD97P48960 835 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 MAZP56270 477 aaKnown RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 RAB15P59190 212 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 IGFBP7Q16270 282 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 MAN2A1Q16706 1144 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 CFAP58Q5T655 872 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 TAF3Q5VWG9 929 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 NAA35Q5VZE5 725 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 DPPA4Q7L190 304 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 ZNF354CQ86Y25 554 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 CACNA2D3Q8IZS8 1091 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 BMPERQ8N8U9 685 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 NETO2Q8NC67 525 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 RCBTB1Q8NDN9 531 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 JOSD2Q8TAC2 188 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 C9orf43Q8TAL5 461 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 GPT2Q8TD30 523 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 FAM172AQ8WUF8 416 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 CPA5Q8WXQ8 436 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 ART4Q93070 314 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 TEFMQ96QE5 360 aaKnown RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 LGR4Q9BXB1 951 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 GSDMCQ9BYG8 508 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 WDR26Q9H7D7 661 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 CYP4F12Q9HCS2 524 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 SPATS2LQ9NUQ6 558 aaKnown RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 KCTD5Q9NXV2 234 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 PDP2Q9P2J9 529 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 UBA2Q9UBT2 640 aaPredicted RBP8.21□□□□□ -1.1
USP39-216ENST00000490193 PILRAQ9UKJ1 303 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 B3GALT1Q9Y5Z6 326 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 FHOD1Q9Y613 1164 aa8.21□□□□□ -1.1
USP39-216ENST00000490193 IGHV1OR21-1A0A087WYE8 117 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 F8VZ95 297 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 FGF10O15520 208 aaPredicted RBP8.2□□□□□ -1.1
USP39-216ENST00000490193 RAD1O60671 282 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ECEL1O95672 775 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CEACAM5P06731 702 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 MMEP08473 750 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ELFN1P0C7U0 828 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 SERPINA4P29622 427 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ALDH4A1P30038 563 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CSF2RBP32927 897 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CSTF2P33240 577 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP39-216ENST00000490193 HTR7P34969 479 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 MTIF2P46199 727 aaKnown RBP8.2□□□□□ -1.1
USP39-216ENST00000490193 RGRP47804 291 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 AIF1P55008 147 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 GPLD1P80108 840 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CDC20Q12834 499 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ILF3Q12906 894 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP39-216ENST00000490193 PTP4A2Q12974 167 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 PEX6Q13608 980 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 NCAPHQ15003 741 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 AMZ1Q400G9 498 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 MIIPQ5JXC2 388 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 DCAF12Q5T6F0 453 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 KLHDC7AQ5VTJ3 777 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 PNCKQ6P2M8 343 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 SLFN11Q7Z7L1 901 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CAMK1DQ8IU85 385 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 NAGSQ8N159 534 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 PYROXD2Q8N2H3 581 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 PELI3Q8N2H9 469 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 MIB2Q96AX9 1013 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 COQ10AQ96MF6 247 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 EFHD1Q9BUP0 239 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 TEX101Q9BY14 249 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 FRMD8Q9BZ67 464 aaPredicted RBP8.2□□□□□ -1.1
USP39-216ENST00000490193 NDST4Q9H3R1 872 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 LRRC19Q9H756 370 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ATP13A3Q9H7F0 1226 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CATSPERBQ9H7T0 1116 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 CARS2Q9HA77 564 aaKnown RBP8.2□□□□□ -1.1
USP39-216ENST00000490193 SLC39A1Q9NY26 324 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 TAAR2Q9P1P5 351 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 NOCTQ9UK39 431 aaKnown RBP8.2□□□□□ -1.1
USP39-216ENST00000490193 PCDHB3Q9Y5E6 796 aa8.2□□□□□ -1.1
USP39-216ENST00000490193 ICE1Q9Y2F5 2266 aa8.19□□□□□ -1.1
USP39-216ENST00000490193 NOTCH2Q04721 2471 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms