RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ANKRD66B4E2M5 251 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 FFAR2O15552 330 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 AQP9O43315 295 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 C1SP09871 688 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 PYGMP11217 842 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 CKMT2P17540 419 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 CETN2P41208 172 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 XRCC4Q13426 336 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 QPCTQ16769 361 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 LRRC66Q68CR7 880 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 ESRP1Q6NXG1 681 aaKnown RBP19.13■□□□□ 0.65
EPHB4-207ENST00000489808 PHACTR4Q8IZ21 702 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 PELI3Q8N2H9 469 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 ZNF548Q8NEK5 533 aaPredicted RBP19.13■□□□□ 0.65
EPHB4-207ENST00000489808 LMX1AQ8TE12 382 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 TSACCQ96A04 125 aaPredicted RBP19.13■□□□□ 0.65
EPHB4-207ENST00000489808 FUBP1Q96AE4 644 aaKnown RBP19.13■□□□□ 0.65
EPHB4-207ENST00000489808 NUS1Q96E22 293 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 DTD2Q96FN9 168 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 TBATAQ96M53 351 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 LYSMD1Q96S90 227 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 DUSP23Q9BVJ7 150 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 SLC13A1Q9BZW2 595 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 NLGN3Q9NZ94 848 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 SPASTQ9UBP0 616 aa19.13■□□□□ 0.65
EPHB4-207ENST00000489808 CAPN8A6NHC0 703 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 APOC4-APOC2K7ER74 178 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 K7ESM1 405 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 CACNB4O00305 520 aaPredicted RBP19.12■□□□□ 0.65
EPHB4-207ENST00000489808 ARHGAP6O43182 974 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 GCATO75600 419 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 APOC2P02655 101 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 ALPPL2P10696 532 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 ZNF30P17039 623 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 CD68P34810 354 aaPredicted RBP19.12■□□□□ 0.65
EPHB4-207ENST00000489808 BLKP51451 505 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 HK3P52790 923 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 KIAA1024LP59773 190 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 SRP54P61011 504 aaKnown RBP19.12■□□□□ 0.65
EPHB4-207ENST00000489808 SLC14A2Q15849 920 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 CDKN3Q16667 212 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 HS1BP3Q53T59 392 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 CCDC181Q5TID7 509 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 AADACL2Q6P093 401 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 RFLNAQ6ZTI6 216 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 RBFAQ8N0V3 343 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 CCDC112Q8NEF3 446 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 ATL2Q8NHH9 583 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 WDR92Q96MX6 357 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 MLPHQ9BV36 600 aaPredicted RBP19.12■□□□□ 0.65
EPHB4-207ENST00000489808 ADGRE3Q9BY15 652 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 APOBEC3BQ9UH17 382 aaKnown RBP19.12■□□□□ 0.65
EPHB4-207ENST00000489808 KLK13Q9UKR3 277 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 DNPEPQ9ULA0 475 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 NEUROG3Q9Y4Z2 214 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 SPEGQ15772 3267 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 SHROOM3Q8TF72 1996 aa19.12■□□□□ 0.65
EPHB4-207ENST00000489808 MIF4GDA9UHW6 222 aaKnown RBP19.11■□□□□ 0.65
EPHB4-207ENST00000489808 TPP1O14773 563 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 FTCDO95954 541 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 ACADVLP49748 655 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 STC1P52823 247 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 CDK18Q07002 472 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 DPTQ07507 201 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 C1orf61Q13536 156 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 NOMO1Q15155 1222 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 ALG11Q2TAA5 492 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 CCDC157Q569K6 752 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 PRRT3Q5FWE3 981 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 NYAP1Q6ZVC0 841 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 KDELC2Q7Z4H8 507 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 NLRP8Q86W28 1048 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 HID1Q8IV36 788 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 LRRC8AQ8IWT6 810 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 UBL4BQ8N7F7 174 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 FAM181AQ8N9Y4 354 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 SPATA22Q8NHS9 363 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 HTR3CQ8WXA8 447 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 CNTNAP3BQ96NU0 1288 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 QKIQ96PU8 341 aaKnown RBP eCLIP19.11■□□□□ 0.657e-9■■■■■ 39.1
EPHB4-207ENST00000489808 TRIB3Q96RU7 358 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 VAT1Q99536 393 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 LGR4Q9BXB1 951 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 CNTNAP3Q9BZ76 1288 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 TSGA10Q9BZW7 698 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 ABCG8Q9H221 673 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 WDR26Q9H7D7 661 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 PACSIN2Q9UNF0 486 aaPredicted RBP19.11■□□□□ 0.65
EPHB4-207ENST00000489808 MSRB2Q9Y3D2 182 aa19.11■□□□□ 0.65
EPHB4-207ENST00000489808 TMEM202A6NGA9 273 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 H7C0C1 242 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 PDE2AO00408 941 aaPredicted RBP19.1■□□□□ 0.65
EPHB4-207ENST00000489808 DDX3YO15523 660 aaKnown RBP19.1■□□□□ 0.65
EPHB4-207ENST00000489808 TJP3O95049 919 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 RASGRP1O95267 797 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 CLDN7O95471 211 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 MT-CYBP00156 380 aaPredicted RBP19.1■□□□□ 0.65
EPHB4-207ENST00000489808 TNFP01375 233 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 CDK4P11802 303 aa19.1■□□□□ 0.65
EPHB4-207ENST00000489808 TSHRP16473 764 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms