RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NSMCE3Q96MG7 304 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 TAAR9Q96RI9 348 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 CNPY3Q9BT09 278 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 GSDMCQ9BYG8 508 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 ADNPQ9H2P0 1102 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 PCDHGA3Q9Y5H0 932 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 PTPN13Q12923 2485 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 ANKRD62A6NC57 917 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 ECEL1O95672 775 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 FUCA1P04066 466 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 AK4P27144 223 aaPredicted RBP19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 CD1CP29017 333 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 ILF3Q12906 894 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 BORAQ6PGQ7 559 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 NUS1Q96E22 293 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 COQ10AQ96MF6 247 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 SEPT11Q9NVA2 429 aaKnown RBP19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 TAAR2Q9P1P5 351 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 B4GALT6Q9UBX8 382 aa19.46■□□□□ 0.71
SMPDL3A-202ENST00000487215 SDK2Q58EX2 2172 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 CEACAM5P06731 702 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 LIMK2P53671 638 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 OGDHQ02218 1023 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 NSUN2Q08J23 767 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 CA9Q16790 459 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 ARHGAP36Q6ZRI8 547 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 HEATR4Q86WZ0 1026 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 PTRH1Q86Y79 214 aaKnown RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 ARHGAP12Q8IWW6 846 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 ZNF564Q8TBZ8 553 aaPredicted RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 PTCD2Q8WV60 388 aaKnown RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 PATE1Q8WXA2 126 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 TEX101Q9BY14 249 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 FRMD8Q9BZ67 464 aaPredicted RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 SP110Q9HB58 689 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 PHPT1Q9NRX4 125 aaPredicted RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 TRNAU1APQ9NX07 287 aaKnown RBP19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 AP4E1Q9UPM8 1137 aa19.45■□□□□ 0.7
SMPDL3A-202ENST00000487215 EEF2KO00418 725 aaKnown RBP19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 ZW10O43264 779 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 LIFP15018 202 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 UGT1A3P35503 534 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 GPR3P46089 330 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 GNPDA1P46926 289 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 SCNN1BP51168 640 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 POLE2P56282 527 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 AP1S1P61966 158 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 KCNAB2Q13303 367 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 TRA2AQ13595 282 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 RFTN1Q14699 578 aaPredicted RBP19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 KRT31Q15323 416 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 SYCP1Q15431 976 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 CNGA3Q16281 694 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 NKAIN2Q5VXU1 208 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 SLC30A9Q6PML9 568 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 IL22RA1Q8N6P7 574 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 NPWQ8N729 165 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 CDH19Q9H159 772 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 DHX35Q9H5Z1 703 aaKnown RBP19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 SUFUQ9UMX1 484 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 SIK3Q9Y2K2 1263 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 ST14Q9Y5Y6 855 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 B3GALT1Q9Y5Z6 326 aa19.44■□□□□ 0.7
SMPDL3A-202ENST00000487215 COL12A1Q99715 3063 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 DFFAO00273 331 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 THRAP10827 490 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 CSF2RBP32927 897 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 IL10RBQ08334 325 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 BIRC2Q13490 618 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 FKBP15Q5T1M5 1219 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 DCUN1D2Q6PH85 259 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 NAGSQ8N159 534 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 AGBL5Q8NDL9 886 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 CCDC112Q8NEF3 446 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 OR4D9Q8NGE8 314 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 SPOCK2Q92563 424 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 ART4Q93070 314 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 DDA1Q9BW61 102 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 EPN3Q9H201 632 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 CHMP5Q9NZZ3 219 aa19.43■□□□□ 0.7
SMPDL3A-202ENST00000487215 IGHV1OR21-1A0A087WYE8 117 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 TTC24A2A3L6 582 aaPredicted RBP19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 PPM1DO15297 605 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 HEXIM1O94992 359 aaKnown RBP19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 ERCC2P18074 760 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 MPSTP25325 297 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 CDK3Q00526 305 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 CTBSQ01459 385 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 SKIDA1Q1XH10 827 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 CDKAL1Q5VV42 579 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 DENND2CQ68D51 928 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 RFX8Q6ZV50 586 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 CACNA2D3Q8IZS8 1091 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 DTD2Q96FN9 168 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 PSKH2Q96QS6 385 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 KCTD15Q96SI1 283 aaPredicted RBP19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 TMEM9Q9P0T7 183 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 ANKMY1Q9P2S6 941 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 SEPT3Q9UH03 358 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms