RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 FAM90A20PA6NIJ5 464 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 EFCAB8A8MWE9 144 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PEX12O00623 359 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PRYO14603 147 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 ADAM10O14672 748 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 TNPO2O14787 897 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 CTIFO43310 598 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 RPP40O75818 363 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 RNF8O76064 485 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PCCAP05165 728 aaPredicted RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 HSPA5P11021 654 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 UBL4AP11441 157 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PSMA3P25788 255 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PSMA4P25789 261 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 DUSP1P28562 367 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 IGHMBP2P38935 993 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 EIF2DP41214 584 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 MCM2P49736 904 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 RARSP54136 660 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 GHRHRQ02643 423 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 EPS8Q12929 822 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 SEMA3BQ13214 749 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PRICKLE4Q2TBC4 344 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 BMP2KLQ5H9B9 411 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 MSANTD2Q6P1R3 559 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 ACSM6Q6P461 480 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 SYNE3Q6ZMZ3 975 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 IKBIPQ70UQ0 350 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 CEP97Q8IW35 865 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 LINS1Q8NG48 757 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 NFKBIDQ8NI38 313 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 WDR60Q8WVS4 1066 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 OVCA2Q8WZ82 227 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 PRMT6Q96LA8 375 aaPredicted RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 PARK7Q99497 189 aaKnown RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 CDX2Q99626 313 aaPredicted RBP4.33□□□□□ -1.72
CDC7-204ENST00000486509 TM2D2Q9BX73 214 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 C1QTNF1Q9BXJ1 281 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 EDEM3Q9BZQ6 932 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 NUAK2Q9H093 628 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDC7-204ENST00000486509 RMI1Q9H9A7 625 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 ZDHHC7Q9NXF8 308 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 SEL1LQ9UBV2 794 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 TSPYL4Q9UJ04 414 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 TMCC3Q9ULS5 477 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 DOCK3Q8IZD9 2030 aa4.33□□□□□ -1.72
CDC7-204ENST00000486509 SPEF2Q9C093 1822 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 GXYLT2A0PJZ3 443 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 CLRN2A0PK11 232 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 KIF28PB7ZC32 967 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 H0Y626 953 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 PDHXO00330 501 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 SH2B2O14492 632 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 TSPAN4O14817 238 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 MOSPD3O75425 235 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 TAF5LO75529 589 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 CYP21A2P08686 494 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 SCG2P13521 617 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 EIF2S2P20042 333 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 IDUAP35475 653 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 GSTM5P46439 218 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 PPP5CP53041 499 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 AIMP1Q12904 312 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 PRPF4BQ13523 1007 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 SMC1AQ14683 1233 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 TRIP6Q15654 476 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 PFKFB3Q16875 520 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 FKBP1CQ5VVH2 108 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 NAA35Q5VZE5 725 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 IL27RAQ6UWB1 636 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 C16orf89Q6UX73 402 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 KYAT3Q6YP21 454 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 LMNTD2Q8IXW0 634 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 OR8H3Q8N146 312 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 CERS5Q8N5B7 392 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 NAT8LQ8N9F0 302 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 OR8H1Q8NGG4 311 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 ETNPPLQ8TBG4 499 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 DENND1AQ8TEH3 1009 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 WIPF2Q8TF74 440 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 KTI12Q96EK9 354 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 P2RY11Q96G91 374 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 PLEKHF1Q96S99 279 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 PHF7Q9BWX1 381 aaPredicted RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 ANKRD2Q9GZV1 360 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 MUC13Q9H3R2 512 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 C11orf49Q9H6J7 331 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 VEZTQ9HBM0 779 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 XAB2Q9HCS7 855 aaKnown RBP4.32□□□□□ -1.72
CDC7-204ENST00000486509 CD209Q9NNX6 404 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 HYPKQ9NX55 129 aa4.32□□□□□ -1.72
CDC7-204ENST00000486509 DBF4Q9UBU7 674 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms