RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 MAPK4P31152 587 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 RPL9P32969 192 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 GRK5P34947 590 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 BMI1P35226 326 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ADRA1BP35368 520 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 PPARGP37231 505 aaPredicted RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 MAGEA1P43355 309 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 GPR3P46089 330 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CPT1AP50416 773 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 PPP5CP53041 499 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NAPAP54920 295 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 IL13RA1P78552 427 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 FSTL1Q12841 308 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DNAJC3Q13217 504 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 MPP3Q13368 585 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 HNRNPDQ14103 355 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DAG1Q14118 895 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SPIDRQ14159 915 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 RCN2Q14257 317 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NAB2Q15742 525 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SNCBQ16143 134 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 EDRF1Q3B7T1 1238 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 KCTD21Q4G0X4 260 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ZNF805Q5CZA5 627 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CEP78Q5JTW2 689 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 GLRA4Q5JXX5 417 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DEPDC1Q5TB30 811 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 BROXQ5VW32 411 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ETFRF1Q6IPR1 90 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 TCTN3Q6NUS6 607 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 MTFR2Q6P444 385 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ABHD17CQ6PCB6 329 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ZNF600Q6ZNG1 722 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 HEATR3Q7Z4Q2 680 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 WDR49Q8IV35 697 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 IQCKQ8N0W5 287 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 BBS5Q8N3I7 341 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CELF5Q8N6W0 485 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DNAAF3Q8N9W5 541 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CCDC63Q8NA47 563 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 PSMA8Q8TAA3 256 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CAGE1Q8TC20 777 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 TBCKQ8TEA7 893 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 THRSPQ92748 146 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 KAT2BQ92831 832 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 COA7Q96BR5 231 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 AJUBAQ96IF1 538 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 C7orf34Q96L11 122 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ADAD1Q96M93 576 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SMC6Q96SB8 1091 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DMRTA2Q96SC8 542 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 PLIN2Q99541 437 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 HEPHQ9BQS7 1158 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CCDC77Q9BR77 488 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 APOL6Q9BWW8 343 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 TLR10Q9BXR5 811 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 IFIH1Q9BYX4 1025 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 GORASP2Q9H8Y8 452 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SARS2Q9NP81 518 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 CCM2LQ9NUG4 571 aaPredicted RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 DDX43Q9NXZ2 648 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SEC63Q9UGP8 760 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 FEM1BQ9UK73 627 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 TLK1Q9UKI8 766 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ANGPTL2Q9UKU9 493 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 OGDHLQ9ULD0 1010 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NENFQ9UMX5 172 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SCAF8Q9UPN6 1271 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SATB2Q9UPW6 733 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NOC2LQ9Y3T9 749 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 SPO11Q9Y5K1 396 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 POMT1Q9Y6A1 747 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 BZW2Q9Y6E2 419 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 FAM169AQ9Y6X4 670 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 COMMD3-BMI1R4GMX3 469 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NHSQ6T4R5 1651 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 NAV1Q8NEY1 1877 aa4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 BAZ2BQ9UIF8 2168 aaKnown RBP4.08□□□□□ -1.76
PRPF38B-205ENST00000485810 ATAD5Q96QE3 1844 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 MYH1P12882 1939 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 A0A0A6YYK5 440 aaPredicted RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 LRRC53A6NM62 1247 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 TRDMT1O14717 391 aaKnown RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 EPHB6O15197 1021 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 EIF3HO15372 352 aaKnown RBP eCLIP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 CD3EAPO15446 510 aaKnown RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 CYTIPO60759 359 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 KRT37O76014 449 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 NOL4O94818 638 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 FTCDO95954 541 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 ALDH2P05091 517 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 SERPING1P05155 500 aa4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 HSPA8P11142 646 aaKnown RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 ATP2A2P16615 1042 aaKnown RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 ZFXP17010 805 aaPredicted RBP4.07□□□□□ -1.76
PRPF38B-205ENST00000485810 GLRA2P23416 452 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms