RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 MYCLP1P12525 358 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 ZNF165P49910 485 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 CDH6P55285 790 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 B3GNT8Q7Z7M8 397 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 TEX26Q8N6G2 289 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 FAM46DQ8NEK8 389 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NSMCE1Q8WV22 266 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 DTD2Q96FN9 168 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 FUCA2Q9BTY2 467 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 LGR4Q9BXB1 951 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 FRMD8Q9BZ67 464 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 B3GNT4Q9C0J1 378 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 TMEM168Q9H0V1 697 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PHPT1Q9NRX4 125 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 IP6K2Q9UHH9 426 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PRSS38A1L453 326 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NUDT21O43809 227 aaKnown RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SERPINB6P35237 376 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PBX1P40424 430 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NR1D2Q14995 579 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SPRED1Q7Z699 444 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NLRP8Q86W28 1048 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PELI3Q8N2H9 469 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PAF1Q8N7H5 531 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 KIAA1524Q8TCG1 905 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 IQCDQ96DY2 449 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SCRN2Q96FV2 425 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 MCCC1Q96RQ3 725 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SYNDIG1Q9H7V2 258 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NOD2Q9HC29 1040 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 EPB41L5Q9HCM4 733 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 CYP4F12Q9HCS2 524 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 MRPL40Q9NQ50 206 aaKnown RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 TRNAU1APQ9NX07 287 aaKnown RBP11.47□□□□□ -0.57
SCFD1-206ENST00000484733 SCN8AQ9UQD0 1980 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 RNF215Q9Y6U7 377 aa11.47□□□□□ -0.57
SCFD1-206ENST00000484733 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
SCFD1-206ENST00000484733 PGLSO95336 258 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 CYP1A2P05177 515 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 CEACAM5P06731 702 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 CCNB1P14635 433 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 TCF4P15884 667 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 B4GALNT1Q00973 533 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 SLC25A11Q02978 314 aaKnown RBP11.46□□□□□ -0.57
SCFD1-206ENST00000484733 DPTQ07507 201 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 TRAF2Q12933 501 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 MARC1Q5VT66 337 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 FOXR1Q6PIV2 292 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 ZNF438Q7Z4V0 828 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 ATPAF2Q8N5M1 289 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 HSPH1Q92598 858 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 FATE1Q969F0 183 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCFD1-206ENST00000484733 LRIT1Q9P2V4 623 aa11.46□□□□□ -0.57
SCFD1-206ENST00000484733 ATXN7L1Q9ULK2 861 aaPredicted RBP11.46□□□□□ -0.57
SCFD1-206ENST00000484733 KIF26BQ2KJY2 2108 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 TTC24A2A3L6 582 aaPredicted RBP11.46□□□□□ -0.58
SCFD1-206ENST00000484733 SERPING1P05155 500 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 IVLP07476 585 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 SLC5A2P31639 672 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 MMP13P45452 471 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 PEX6Q13608 980 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.58
SCFD1-206ENST00000484733 TECPR1Q7Z6L1 1165 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 NRROSQ86YC3 692 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 RAVER1Q8IY67 606 aaKnown RBP11.46□□□□□ -0.58
SCFD1-206ENST00000484733 SCARF2Q96GP6 870 aaPredicted RBP11.46□□□□□ -0.58
SCFD1-206ENST00000484733 GSDMCQ9BYG8 508 aa11.46□□□□□ -0.58
SCFD1-206ENST00000484733 BPTFQ12830 3046 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 A8MX80 341 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 FZD6O60353 706 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 SERPINC1P01008 464 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 KRT10P13645 584 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 LHCGRP22888 699 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 CES1P23141 567 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 IL4RP24394 825 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 ARSEP51690 589 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 ARMC12Q5T9G4 340 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 ALG1LQ6GMV1 187 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 CCDC81Q6ZN84 652 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF765Q7L2R6 523 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 HSD11B1LQ7Z5J1 315 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 HEATR4Q86WZ0 1026 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 SLITRK4Q8IW52 837 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 CCL4L1Q8NHW4 92 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 CCNL2Q96S94 520 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-206ENST00000484733 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
SCFD1-206ENST00000484733 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 SLC17A4Q9Y2C5 497 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 CELSR3Q9NYQ7 3312 aa11.45□□□□□ -0.58
SCFD1-206ENST00000484733 ZW10O43264 779 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 FUCA1P04066 466 aa11.44□□□□□ -0.58
SCFD1-206ENST00000484733 FGF1P05230 155 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms