RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 BAIAP3O94812 1187 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 SUPT7LO94864 414 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 LRIG2O94898 1065 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 LGALS2P05162 132 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NCK1P16333 377 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NPR3P17342 541 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 CDH3P22223 829 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ELK4P28324 431 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 RFC2P35250 354 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 RPS9P46781 194 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 KPNA2P52292 529 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ADARB1P78563 741 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ITGADQ13349 1161 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 AGAP9Q5VTM2 703 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NIPAL1Q6NVV3 410 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 CLEC20AQ6ZU45 233 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ZNF513Q8N8E2 541 aaPredicted RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 TERB1Q8NA31 727 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 SNX19Q92543 992 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 CAMKK2Q96RR4 588 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ULBP1Q9BZM6 244 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 TRIM15Q9C019 465 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 PDGFDQ9GZP0 370 aaPredicted RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 MRM3Q9HC36 420 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 RIC8BQ9NVN3 520 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 OR12D3Q9UGF7 316 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 DSEQ9UL01 958 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 GINS2Q9Y248 185 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ERGIC3Q9Y282 383 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 CPNE6O95741 557 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 LTA4HP09960 611 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NCAM1P13591 858 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 IMPDH1P20839 514 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 MAP4P27816 1152 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 AXLP30530 894 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 BAG6P46379 1132 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 GALNT1Q10472 559 aaPredicted RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 PYCR3Q53H96 274 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NEPROQ6NW34 567 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 TMEM207Q6UWW9 146 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 ALKAL1Q6UXT8 129 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 IFNEQ86WN2 208 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 APPL2Q8NEU8 664 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 PPHLN1Q8NEY8 458 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 TRUB1Q8WWH5 349 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 CCDC126Q96EE4 140 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 NXF3Q9H4D5 531 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 DDIT4Q9NX09 232 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 KLK14Q9P0G3 267 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 TMEM9Q9P0T7 183 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 DNAJC15Q9Y5T4 150 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 MRPL42Q9Y6G3 142 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 SLC30A1Q9Y6M5 507 aa19.78■□□□□ 0.76
RPUSD3-216ENST00000484134 C1orf232A0A0U1RR37 186 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 TCRBV5S2A0A599 114 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 BBIP1A8MTZ0 92 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 AP3B1O00203 1094 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 ZNF286BP0CG31 522 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 C7P10643 843 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 DNAJB2P25686 324 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 MAP3K7CLP57077 242 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 SH3BP2P78314 561 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 EN1Q05925 392 aaPredicted RBP19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 UNC50Q53HI1 259 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 NOMO2Q5JPE7 1267 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 SGCDQ92629 289 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 LRRC58Q96CX6 371 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 UBXN10Q96LJ8 280 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 ALG9Q9H6U8 611 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 NDUFAF1Q9Y375 327 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 PCDHA9Q9Y5H5 950 aa19.77■□□□□ 0.76
RPUSD3-216ENST00000484134 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 IGFBP6P24592 240 aaPredicted RBP19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 FOXA1P55317 472 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 BNIP2Q12982 314 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 RABL3Q5HYI8 236 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 ZNF678Q5SXM1 525 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 CCNYL2Q5T2Q4 361 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 GPRIN1Q7Z2K8 1008 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 IGFN1Q86VF2 1251 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 SMG8Q8ND04 991 aaKnown RBP19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 BPIFB6Q8NFQ5 453 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 ERLEC1Q96DZ1 483 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 GLT1D1Q96MS3 346 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 TUBA1CQ9BQE3 449 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 YIPF2Q9BWQ6 316 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 SLC52A3Q9NQ40 469 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 VWA7Q9Y334 891 aa19.77■□□□□ 0.75
RPUSD3-216ENST00000484134 TMEM247A6NEH6 219 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 CFAP99D6REC4 459 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 RECQL4O94761 1208 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 SOX4Q06945 474 aaPredicted RBP19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 SEPT6Q14141 434 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 RGS21Q2M5E4 152 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 XAF1Q6GPH4 301 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 BTLAQ7Z6A9 289 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 MUS81Q96NY9 551 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 COLEC11Q9BWP8 271 aa19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 TDRD1Q9BXT4 1180 aaKnown RBP19.76■□□□□ 0.75
RPUSD3-216ENST00000484134 PALMDQ9NP74 551 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms