RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 EPHB1P54762 984 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 PTPRRQ15256 657 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 GEN1Q17RS7 908 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 GAB4Q2WGN9 574 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 TAF1BQ53T94 588 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 HECTD2Q5U5R9 776 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 ANKRD54Q6NXT1 300 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 RAPH1Q70E73 1250 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 LDB1Q86U70 411 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 ETFBKMTQ8IXQ9 262 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 OR6K2Q8NGY2 324 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 WFIKKN2Q8TEU8 576 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 TSPAN17Q96FV3 270 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 C7orf26Q96N11 449 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 ZNF641Q96N77 438 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 OLFM1Q99784 485 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 FAM83CQ9BQN1 747 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 PLCD4Q9BRC7 762 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 IGFLR1Q9H665 355 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 NMRAL1Q9HBL8 299 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 KLHL14Q9P2G3 628 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 HECAQ9UBI9 543 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 CHD9Q3L8U1 2897 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 G3V2L1 256 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 TRIM24O15164 1050 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 KLHL2O95198 593 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 ADH1CP00326 375 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CPA3P15088 417 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 POLR2EP19388 210 aaKnown RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 FCARP24071 287 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 XIAPP98170 497 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 OCRLQ01968 901 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 BST1Q10588 318 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 IFT88Q13099 833 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 PEX6Q13608 980 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CHI3L2Q15782 390 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 PNPLA1Q8N8W4 532 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CCDC63Q8NA47 563 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 RDH11Q8TC12 318 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 ZNF398Q8TD17 642 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 FRS2Q8WU20 508 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 NSUN3Q9H649 340 aaKnown RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 POLR3BQ9NW08 1133 aaPredicted RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 RUVBL2Q9Y230 463 aaKnown RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 CHD7Q9P2D1 2997 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 A0A1W2PQ67 120 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CCT8L1PA6NM43 557 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 HEPACAM2A8MVW5 462 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SLC34A2O95436 690 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 ASLP04424 464 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SRPRAP08240 638 aaKnown RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 SBK3P0C264 359 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 NEFHP12036 1026 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CTPS1P17812 591 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SAT1P21673 171 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SLC26A3P40879 764 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 DGKGP49619 791 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SUOXP51687 545 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CCNHP51946 323 aaPredicted RBP14.04□□□□□ -0.16
CLK3-204ENST00000483723 PGGT1BP53609 377 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 IRX4P78413 519 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■■ 33.6
CLK3-204ENST00000483723 RAD51Q06609 339 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 DLG1Q12959 904 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 TSNAXIP1Q2TAA8 658 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 TRIM68Q6AZZ1 485 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 FAM45BPQ6NSW5 357 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 DPY19L3Q6ZPD9 716 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 LYSMD3Q7Z3D4 306 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 OTUD6BQ8N6M0 293 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 OR2A12Q8NGT7 310 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 FAM45AQ8TCE6 357 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 CCT6BQ92526 530 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 UBXN10Q96LJ8 280 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 NDNQ99608 321 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 FKBPLQ9UIM3 349 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 MID2Q9UJV3 735 aa14.04□□□□□ -0.16
CLK3-204ENST00000483723 SCN8AQ9UQD0 1980 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 ZNF106Q9H2Y7 1883 aaKnown RBP14.03□□□□□ -0.16
CLK3-204ENST00000483723 CAPN8A6NHC0 703 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 LINC01565O15544 149 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 NFATC1O95644 943 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 ALPIP09923 528 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 ARSAP15289 507 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 FDXRP22570 491 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 HNF1BP35680 557 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 SLC12A2P55011 1212 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 STX3Q13277 289 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 ADAM15Q13444 863 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 TCEAL5Q5H9L2 206 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 C10orf107Q8IVU9 208 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 CBARPQ8N350 705 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms