RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 FCRL5Q96RD9 977 aa9.65□□□□□ -0.86
HMG20B-210ENST00000483417 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.86
HMG20B-210ENST00000483417 DDX47Q9H0S4 455 aaKnown RBP9.65□□□□□ -0.86
HMG20B-210ENST00000483417 ETNK1Q9HBU6 452 aa9.65□□□□□ -0.86
HMG20B-210ENST00000483417 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
HMG20B-210ENST00000483417 KLHL8Q9P2G9 620 aaPredicted RBP9.65□□□□□ -0.86
HMG20B-210ENST00000483417 ITM2BQ9Y287 266 aa9.65□□□□□ -0.86
HMG20B-210ENST00000483417 CA5BQ9Y2D0 317 aa9.65□□□□□ -0.86
HMG20B-210ENST00000483417 COL5A1P20908 1838 aaPredicted RBP9.65□□□□□ -0.86
HMG20B-210ENST00000483417 ANKRD36A6QL64 1941 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 TCRBV7S3A2A0A539 114 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 SRRM3A6NNA2 597 aaPredicted RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 YKT6O15498 198 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 MAGEC1O60732 1142 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 PGLSO95336 258 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 ALPIP09923 528 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 GIMD1P0DJR0 217 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 ADRB3P13945 408 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 GRIA1P42261 906 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 CHRNA4P43681 627 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 NEK3P51956 506 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 WNT3AP56704 352 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 RAD51Q06609 339 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 SMAD1Q15797 465 aaKnown RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 PCSK7Q16549 785 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 CCDC137Q6PK04 289 aaKnown RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 KDM7AQ6ZMT4 941 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 ABI3BPQ7Z7G0 1075 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 OXR1Q8N573 874 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 EID2Q8N6I1 236 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 MAIP1Q8WWC4 291 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 FUBP1Q96AE4 644 aaKnown RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 RTP4Q96DX8 246 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 KLHDC7BQ96G42 594 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 ZNF641Q96N77 438 aaPredicted RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 TRIB3Q96RU7 358 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 KLF6Q99612 283 aaPredicted RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 APOL2Q9BQE5 337 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 CAAP1Q9H8G2 361 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 PCDH12Q9NPG4 1184 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 AMACRQ9UHK6 382 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 CDC23Q9UJX2 597 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 TRHDEQ9UKU6 1024 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 PCDHGA1Q9Y5H4 931 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 HS3ST3A1Q9Y663 406 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 PTPRBP23467 1997 aa9.64□□□□□ -0.87
HMG20B-210ENST00000483417 TPRP12270 2363 aaKnown RBP9.64□□□□□ -0.87
HMG20B-210ENST00000483417 AKAP13Q12802 2813 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 LOC285095A0A1B0GVY8 99 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 ESPNB1AK53 854 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 RIOK3O14730 519 aaKnown RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 AREL1O15033 823 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 RAD51BO15315 384 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 MTSS1O43312 755 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 MMP20O60882 483 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PHF2O75151 1096 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 USP12O75317 370 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 NEBLO76041 1014 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PCDH8O95206 1070 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PAK4O96013 591 aaPredicted RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 KRT14P02533 472 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PIRTP0C851 137 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 TPH1P17752 444 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 HNRNPA2B1P22626 353 aaKnown RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 CES1P23141 567 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 ADRA1AP35348 466 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 HNF1BP35680 557 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 HSPA9P38646 679 aaKnown RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 ARRB1P49407 418 aaPredicted RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 VPS41P49754 854 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 CLDN2P57739 230 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 AP1S1P61966 158 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 RPS21P63220 83 aaKnown RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 C2orf54Q08AI8 447 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 MSLNQ13421 630 aaPredicted RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 GALNT3Q14435 633 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 TRADDQ15628 312 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 CDKN3Q16667 212 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 QPCTQ16769 361 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 UGP2Q16851 508 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PARP6Q2NL67 630 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 KCTD11Q693B1 232 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 DENND5AQ6IQ26 1287 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 FBXL19Q6PCT2 694 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 GCNT7Q6ZNI0 430 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 GSTA5Q7RTV2 222 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 TSPAN33Q86UF1 283 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 MARCH9Q86YJ5 346 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 SLC22A18ASQ8N1D0 253 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 BBS5Q8N3I7 341 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 SLC25A41Q8N5S1 370 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
HMG20B-210ENST00000483417 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 SPATA4Q8NEY3 305 aa9.63□□□□□ -0.87
HMG20B-210ENST00000483417 ASB12Q8WXK4 309 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms