RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SYT16Q17RD7 645 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 SPATA1Q5VX52 437 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 WDR73Q6P4I2 378 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 C19orf48Q6RUI8 117 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 CYP26C1Q6V0L0 522 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 B3GNT6Q6ZMB0 384 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 C1orf122Q6ZSJ8 110 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 DSG4Q86SJ6 1040 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 ODF3L1Q8IXM7 274 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 GJC3Q8NFK1 279 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 CTCFLQ8NI51 663 aaPredicted RBP3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 SDCCAG3Q96C92 435 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZBTB10Q96DT7 871 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZSCAN31Q96LW9 406 aaPredicted RBP3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 DUX3Q96PT4 197 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 SEC62Q99442 399 aaKnown RBP3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 TRMT61BQ9BVS5 477 aaKnown RBP3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 C1QTNF5Q9BXJ0 243 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 RIC8AQ9NPQ8 531 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 SAGE1Q9NXZ1 904 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 CISD1Q9NZ45 108 aaKnown RBP3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 C1RLQ9NZP8 487 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 SLC13A4Q9UKG4 626 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 PCDHGB5Q9Y5G0 923 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 A3GALT2U3KPV4 340 aa3.08□□□□□ -1.92
LAPTM4A-202ENST00000483117 TAF1P21675 1872 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 A0A0U1RQF3 1178 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ERI2A8K979 691 aaKnown RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 B9A039 149 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 PLRG1O43660 514 aaKnown RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 TK1P04183 234 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZNF8P17098 575 aaPredicted RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ELF1P32519 619 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 STX2P32856 288 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 TIMP3P35625 211 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 VEGFCP49767 419 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 RELQ04864 619 aaPredicted RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 TAF12Q16514 161 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ALDH1L2Q3SY69 923 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 CTXN3Q4LDR2 81 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ANKRD45Q5TZF3 282 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM43BQ6ZT52 329 aaPredicted RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 OR8H2Q8N162 312 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 CPXM2Q8N436 756 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 RAB40AQ8WXH6 277 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 CNOT9Q92600 299 aaKnown RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 RND1Q92730 232 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 OTULINQ96BN8 352 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 SLC26A6Q9BXS9 759 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 GFRA4Q9GZZ7 299 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 CSTL1Q9H114 145 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZNF696Q9H7X3 374 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 RRN3Q9NYV6 651 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 TAAR2Q9P1P5 351 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 KIF17Q9P2E2 1029 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 DNAJC16Q9Y2G8 782 aa3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 ATXN2Q99700 1313 aaKnown RBP3.07□□□□□ -1.92
LAPTM4A-202ENST00000483117 C17orf113A0A1B0GUU1 675 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 ARHGAP10A1A4S6 786 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 PABPN1LA6NDY0 278 aaKnown RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 F5H0A9 414 aaPredicted RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM72CH0Y354 149 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 PER2O15055 1255 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 EDIL3O43854 480 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 TMCC2O75069 709 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 RFPL2O75678 378 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 NDUFB4O95168 129 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 IFIT1P09914 478 aaKnown RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 WEE2P0C1S8 567 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CDH1P12830 882 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 HLA-DOBP13765 273 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CAPN3P20807 821 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 KRT9P35527 623 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CDKN1AP38936 164 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CLDN2P57739 230 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 ACTR2P61160 394 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 ERVK11-1P61568 191 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 MPP1Q00013 466 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 G3BP1Q13283 466 aaKnown RBP eCLIP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 TOMM20Q15388 145 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 TAF11Q15544 211 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CCDC6Q16204 474 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 PDS5AQ29RF7 1337 aaKnown RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 ADCK5Q3MIX3 580 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM72AQ5TYM5 149 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 IRAK1BP1Q5VVH5 260 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM72DQ6L9T8 149 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CCNI2Q6ZMN8 369 aaPredicted RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 TBC1D26Q86UD7 250 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 MOGAT3Q86VF5 341 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 FAM72BQ86X60 149 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 FTSJ3Q8IY81 847 aaKnown RBP3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 TMEM57Q8N5G2 664 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 WDSUB1Q8N9V3 476 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 KCNH5Q8NCM2 988 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 CEP70Q8NHQ1 597 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 BBS10Q8TAM1 723 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 SNAPC3Q92966 411 aa3.06□□□□□ -1.92
LAPTM4A-202ENST00000483117 ZNF501Q96CX3 271 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms