RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SHFQ7M4L6 423 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 SZRD1Q7Z422 152 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 OR14L1PQ8NHC6 308 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 ADAMTS14Q8WXS8 1223 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 ZKSCAN4Q969J2 545 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 FAM120BQ96EK7 910 aaKnown RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 RBM38Q9H0Z9 239 aaKnown RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 SYNCQ9H7C4 482 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 KAT14Q9H8E8 782 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 RRP7BPQ9NSQ0 103 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 NSMCE4AQ9NXX6 385 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 INO80B-WBP1J3KQ70 363 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 HCRTR2O43614 444 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 AHCYL1O43865 530 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 CRYABP02511 175 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 GABRB1P18505 474 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 MAOAP21397 527 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 GPTP24298 496 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 HNRNPH1P31943 449 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 PSMB10P40306 273 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 MXI1P50539 228 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 NUDT6P53370 316 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 CUL4AQ13619 759 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 ACVR2BQ13705 512 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 EIF2S3LQ2VIR3 472 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 B3GNT6Q6ZMB0 384 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 CHST9Q7L1S5 443 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 FOXRED2Q8IWF2 684 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 ADGRF2Q8IZF7 708 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 SPATA6LQ8N4H0 392 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 OIT3Q8WWZ8 545 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 POMGNT1Q8WZA1 660 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 SMG7Q92540 1137 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 HAUS8Q9BT25 410 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 DCLK3Q9C098 648 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 TMX4Q9H1E5 349 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 GPR108Q9NPR9 543 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 HINT3Q9NQE9 182 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 ADD3Q9UEY8 706 aaKnown RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 ZNF215Q9UL58 517 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-210ENST00000482158 FZD10Q9ULW2 581 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 ERVK-11Q9UQG0 969 aa5.8□□□□□ -1.48
SF3B1-210ENST00000482158 DYTNA2CJ06 578 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 SCAMP1O15126 338 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 SLC25A12O75746 678 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 G6PDP11413 515 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 CDK4P11802 303 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 PORP16435 677 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 CD58P19256 250 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 AMTP48728 403 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 METAP2P50579 478 aaKnown RBP eCLIP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 CDH8P55286 799 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 PRAMEP78395 509 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 NEDD9Q14511 834 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 CRYMQ14894 314 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 ASTE1Q2TB18 679 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 PMS2CLQ68D20 193 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 KIAA0930Q6ICG6 404 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 SEPT14Q6ZU15 432 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 RPAP2Q8IXW5 612 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-210ENST00000482158 FCRL4Q96PJ5 515 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 SPRY4Q9C004 299 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 MMP25Q9NPA2 562 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 SETD4Q9NVD3 440 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 RCOR1Q9UKL0 485 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 EVPLQ92817 2033 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 ARHGEF40Q8TER5 1519 aa5.79□□□□□ -1.48
SF3B1-210ENST00000482158 hCG_1807616A0A1W2PRN6 198 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 CLEC18AA5D8T8 446 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 CD8B2A6NJW9 211 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 OR6C75A6NL08 312 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 VCYO14598 125 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 ASAP2O43150 1006 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 ZIC3O60481 467 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 NDUFS3O75489 264 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 MCM3P25205 808 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 LMO1P25800 156 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 HOXD3P31249 432 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 HOXA11P31270 313 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 ACSL1P33121 698 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 LINC00205P59089 165 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 LRIF1Q5T3J3 769 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 FAM69BQ5VUD6 431 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 CFAP77Q6ZQR2 320 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 DPPA4Q7L190 304 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 HJURPQ8NCD3 748 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 CLEC18CQ8NCF0 446 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 SGCDQ92629 289 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 RRNAD1Q96FB5 475 aaKnown RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 LRFN5Q96NI6 719 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 OR2A14Q96R47 310 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 ACOX2Q99424 681 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 SEPT5Q99719 369 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 IFIH1Q9BYX4 1025 aaKnown RBP5.78□□□□□ -1.48
SF3B1-210ENST00000482158 SH2D4AQ9H788 454 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 PPP1R3EQ9H7J1 279 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 SLC28A3Q9HAS3 691 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 LTB4R2Q9NPC1 389 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 AGO1Q9UL18 857 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms