RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SOWAHDA6NJG2 315 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 KCNK1O00180 336 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 PPP1R12AO14974 1030 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 IPO7O95373 1038 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 JCHAINP01591 159 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 TRBC1P01850 177 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 ANXA6P08133 673 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 ALPIP09923 528 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 JUPP14923 745 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 TSHRP16473 764 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 CDKN2BP42772 138 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 EPHB1P54762 984 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 RPL26P61254 145 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 NIPAL4Q0D2K0 466 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 C1orf61Q13536 156 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 TFDP2Q14188 446 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 ELOCQ15369 112 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 HSD11B1LQ7Z5J1 315 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 PDCD7Q8N8D1 485 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 TSACCQ96A04 125 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 FUBP1Q96AE4 644 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 BOCQ9BWV1 1114 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 CLPBQ9H078 707 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 CCDC86Q9H6F5 360 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 DKK4Q9UBT3 224 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 DNPEPQ9ULA0 475 aa17.02■□□□□ 0.32
HSPG2-209ENST00000480900 RPL26L1Q9UNX3 145 aaKnown RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 EPN1Q9Y6I3 576 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-209ENST00000480900 KIF26BQ2KJY2 2108 aa17.02■□□□□ 0.31
HSPG2-209ENST00000480900 WDFY3Q8IZQ1 3526 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 PDE2AO00408 941 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-209ENST00000480900 TNFRSF10CO14798 259 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 PRLP01236 227 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 CTSEP14091 401 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 ZNF30P17039 623 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 CTPS1P17812 591 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 TEAD1P28347 426 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 ETV3P41162 512 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 NR2C2P49116 596 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 CLDN6P56747 220 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 INSM1Q01101 510 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-209ENST00000480900 AP1B1Q10567 949 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 C6orf132Q5T0Z8 1188 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 DENND2CQ68D51 928 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 LVRNQ6Q4G3 990 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 NPNTQ6UXI9 565 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 TSPAN33Q86UF1 283 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 KATNAL2Q8IYT4 538 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.01■□□□□ 0.31
HSPG2-209ENST00000480900 OR56A4Q8NGH8 313 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 GLMNQ92990 594 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 PDXPQ96GD0 296 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 CALR3Q96L12 384 aaKnown RBP17.01■□□□□ 0.31
HSPG2-209ENST00000480900 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 PCDH9Q9HC56 1237 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 TFR2Q9UP52 801 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 CHKBQ9Y259 395 aa17.01■□□□□ 0.31
HSPG2-209ENST00000480900 COL27A1Q8IZC6 1860 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-209ENST00000480900 TRABD2BA6NFA1 517 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 CAPN8A6NHC0 703 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 YY2O15391 372 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 MMP2P08253 660 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 MYCLP1P12525 358 aaPredicted RBP17■□□□□ 0.31
HSPG2-209ENST00000480900 MYF5P13349 255 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 RPIAP49247 311 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 DYNLT1P63172 113 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 DPTQ07507 201 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 PTPRRQ15256 657 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 NR0B2Q15466 257 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 TFDP3Q5H9I0 405 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 LRRC66Q68CR7 880 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 SPOCD1Q6ZMY3 1216 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 Q6ZVL8 140 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 BZW1Q7L1Q6 419 aaKnown RBP17■□□□□ 0.31
HSPG2-209ENST00000480900 RD3Q7Z3Z2 195 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 TECPR1Q7Z6L1 1165 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 PROSER1Q86XN7 944 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 PELI3Q8N2H9 469 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 CNTD1Q8N815 330 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 SCG3Q8WXD2 468 aaKnown RBP17■□□□□ 0.31
HSPG2-209ENST00000480900 OR1E3Q8WZA6 343 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 RBM15Q96T37 977 aaKnown RBP eCLIP17■□□□□ 0.31
HSPG2-209ENST00000480900 FGF22Q9HCT0 170 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 PHPT1Q9NRX4 125 aaPredicted RBP17■□□□□ 0.31
HSPG2-209ENST00000480900 DOLKQ9UPQ8 538 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 CLCA2Q9UQC9 943 aa17■□□□□ 0.31
HSPG2-209ENST00000480900 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17■□□□□ 0.31
HSPG2-209ENST00000480900 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 ZFYVE26Q68DK2 2539 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 EME2A4GXA9 379 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-209ENST00000480900 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 OPA1O60313 960 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 CST8O60676 142 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 TNFP01375 233 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 CELA2BP08218 269 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-209ENST00000480900 TGM2P21980 687 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 CD86P42081 329 aa16.99■□□□□ 0.31
HSPG2-209ENST00000480900 TARDBPQ13148 414 aaKnown RBP eCLIP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms