RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 CNGA3Q16281 694 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 CDKN3Q16667 212 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 HSP90B2PQ58FF3 399 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ZDHHC20Q5W0Z9 365 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 AFTPHQ6ULP2 937 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 CES3Q6UWW8 571 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 KIAA0408Q6ZU52 694 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 TAOK1Q7L7X3 1001 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 LYSMD3Q7Z3D4 306 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SLC26A11Q86WA9 606 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 MMAAQ8IVH4 418 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SLC44A1Q8WWI5 657 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SGSM3Q96HU1 749 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 DNAJC1Q96KC8 554 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 ZNF778Q96MU6 729 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 NELL2Q99435 816 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SH3GL2Q99962 352 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 DHRS4Q9BTZ2 278 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 MFSD1Q9H3U5 465 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ZDHHC4Q9NPG8 344 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 PPANQ9NQ55 473 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 B4GALT6Q9UBX8 382 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SARDHQ9UL12 918 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 MMP17Q9ULZ9 603 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 A0A1W2PQF6 199 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 KANSL1LA0AUZ9 987 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CHURC1-FNTBB4DL54 471 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 H0Y858 1186 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 AGPSO00116 658 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 VAPBO95292 243 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 SLC4A1P02730 911 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 INHBAP08476 426 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CHRNB1P11230 501 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ADRB3P13945 408 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 TIMP2P16035 220 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 LHCGRP22888 699 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ARNTP27540 789 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ATP5DP30049 168 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 PLA2G5P39877 138 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 WASP42768 502 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 MSH2P43246 934 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 COPAP53621 1224 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 PTPN5P54829 565 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 ARHGEF7Q14155 803 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 EFTUD2Q15029 972 aaKnown RBP eCLIP12.59□□□□□ -0.39
SIK3-209ENST00000480222 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 LRRC66Q68CR7 880 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 FBXL19Q6PCT2 694 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ERN2Q76MJ5 926 aaKnown RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 GALNT7Q86SF2 657 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CTAGE3PQ8IX95 158 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CBARPQ8N350 705 aaPredicted RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 OR4K2Q8NGD2 314 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 OR13C4Q8NGS5 318 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 PGM2Q96G03 612 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CPNE1Q99829 537 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CDH19Q9H159 772 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 PCDH12Q9NPG4 1184 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 EURLQ9NYK6 297 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 IL17CQ9P0M4 197 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 TXNDC16Q9P2K2 825 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 NFKBIL1Q9UBC1 381 aaPredicted RBP12.59□□□□□ -0.39
SIK3-209ENST00000480222 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 LGALS13Q9UHV8 139 aa12.59□□□□□ -0.39
SIK3-209ENST00000480222 CCDC78A2IDD5 438 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 KRBA1A5PL33 1030 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 RGSL1A5PLK6 1076 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 ANTXRLA6NF34 631 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 AURKAO14965 403 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 AREL1O15033 823 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 AP1G1O43747 822 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 PLXNA2O75051 1894 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 ATG13O75143 517 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 DNTTP04053 509 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
SIK3-209ENST00000480222 CNTFP26441 200 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 TARSP26639 723 aaKnown RBP12.58□□□□□ -0.4
SIK3-209ENST00000480222 SPAM1P38567 509 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 GP5P40197 560 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 SERPINB9P50453 376 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 STC1P52823 247 aa12.58□□□□□ -0.4
SIK3-209ENST00000480222 DCDC1P59894 354 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms