RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 PELI3Q8N2H9 469 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 CBARPQ8N350 705 aaPredicted RBP18.88■□□□□ 0.61
AGRN-208ENST00000479707 SLC25A41Q8N5S1 370 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 DEFB124Q8NES8 71 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 IPMKQ8NFU5 416 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 SETD7Q8WTS6 366 aaKnown RBP18.88■□□□□ 0.61
AGRN-208ENST00000479707 NUS1Q96E22 293 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 MRGPRX2Q96LB1 330 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 SPATA13Q96N96 652 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 GBA3Q9H227 469 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 ERVMER34-1Q9H9K5 563 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 OR1A2Q9Y585 309 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 CABIN1Q9Y6J0 2220 aa18.88■□□□□ 0.61
AGRN-208ENST00000479707 C1orf232A0A0U1RR37 186 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 GOLGA6CA6NDK9 693 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 GOLGA6BA6NDN3 693 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 LIASO43766 372 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 SDC3O75056 442 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 NDST3O95803 873 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 ATP1A1P05023 1023 aaKnown RBP18.87■□□□□ 0.61
AGRN-208ENST00000479707 C1SP09871 688 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 ZNF883P0CG24 379 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 GOLGA6DP0CG33 693 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 ARRB1P49407 418 aaPredicted RBP18.87■□□□□ 0.61
AGRN-208ENST00000479707 THOP1P52888 689 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 SLC14A1Q13336 389 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 SUZ12Q15022 739 aaKnown RBP18.87■□□□□ 0.61
AGRN-208ENST00000479707 SLC14A2Q15849 920 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 LONRF2Q1L5Z9 754 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 DCP2Q8IU60 420 aaKnown RBP18.87■□□□□ 0.61
AGRN-208ENST00000479707 TAB3Q8N5C8 712 aaPredicted RBP18.87■□□□□ 0.61
AGRN-208ENST00000479707 GORASP1Q9BQQ3 440 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 APOOQ9BUR5 198 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 DNAJC28Q9NX36 388 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 GOLGA6AQ9NYA3 693 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 SHOC2Q9UQ13 582 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
AGRN-208ENST00000479707 DNAH14Q0VDD8 3507 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 SPTY2D1-AS1A0A0U1RR47 76 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 C5orf60A6NFR6 353 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 PSMD11O00231 422 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 SLC4A1P02730 911 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 ITGAVP06756 1048 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 ZNF30P17039 623 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 CHRNA4P43681 627 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 TNNT3P45378 269 aaPredicted RBP18.86■□□□□ 0.61
AGRN-208ENST00000479707 GEMP55040 296 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 YPEL5P62699 121 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 MPP3Q13368 585 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 FZD2Q14332 565 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 PRPSAP1Q14558 356 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 SIX1Q15475 284 aaPredicted RBP18.86■□□□□ 0.61
AGRN-208ENST00000479707 CDKN3Q16667 212 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 ARHGEF18Q6ZSZ5 1173 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 DGLUCYQ7Z3D6 616 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 TECPR1Q7Z6L1 1165 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 OXR1Q8N573 874 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 DTD2Q96FN9 168 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 GPR27Q9NS67 375 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 ZNF148Q9UQR1 794 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 BTBD3Q9Y2F9 522 aa18.86■□□□□ 0.61
AGRN-208ENST00000479707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
AGRN-208ENST00000479707 LOC285095A0A1B0GVY8 99 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 K7ESM1 405 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 GIPC1O14908 333 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 ANXA9O76027 345 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 AGTP01019 485 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 EPHA8P29322 1005 aaPredicted RBP18.85■□□□□ 0.61
AGRN-208ENST00000479707 NOVA1P51513 510 aaKnown RBP18.85■□□□□ 0.61
AGRN-208ENST00000479707 STC1P52823 247 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 MTM1Q13496 603 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 OLIG2Q13516 323 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 PTK2BQ14289 1009 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 SIRPB2Q5JXA9 342 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 PNCKQ6P2M8 343 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 NYAP1Q6ZVC0 841 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 LYSMD3Q7Z3D4 306 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 PIP4P1Q86T03 277 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 NAXDQ8IW45 347 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 CCHCR1Q8TD31 782 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 RHBDD1Q8TEB9 315 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 SCAMP4Q969E2 229 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 MS4A14Q96JA4 679 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 LYSMD1Q96S90 227 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 FICDQ9BVA6 458 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 FSD1LQ9BXM9 530 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 FRMD8P1Q9BZ68 369 aaPredicted RBP18.85■□□□□ 0.61
AGRN-208ENST00000479707 ABCG8Q9H221 673 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 SLC32A1Q9H598 525 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 SPTBN4Q9H254 2564 aa18.85■□□□□ 0.61
AGRN-208ENST00000479707 GCATO75600 419 aa18.84■□□□□ 0.61
AGRN-208ENST00000479707 ZNF189O75820 626 aaPredicted RBP18.84■□□□□ 0.61
AGRN-208ENST00000479707 KCNK5O95279 499 aa18.84■□□□□ 0.61
AGRN-208ENST00000479707 IFNB1P01574 187 aa18.84■□□□□ 0.61
AGRN-208ENST00000479707 ATXN1LP0C7T5 689 aaKnown RBP18.84■□□□□ 0.61
AGRN-208ENST00000479707 MSNP26038 577 aaKnown RBP18.84■□□□□ 0.61
AGRN-208ENST00000479707 RXRGP48443 463 aa18.84■□□□□ 0.61
AGRN-208ENST00000479707 EIF2B5Q13144 721 aaKnown RBP18.84■□□□□ 0.61
AGRN-208ENST00000479707 SPARCL1Q14515 664 aa18.84■□□□□ 0.61
AGRN-208ENST00000479707 OASLQ15646 514 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms