RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COILP38432 576 aaPredicted RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 RGRP47804 291 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 NEK3P51956 506 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 TAS2R38P59533 333 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ELP6Q0PNE2 266 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 AP1B1Q10567 949 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 BNIP3Q12983 259 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 RTP5Q14D33 572 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ANKRD20A2Q5SQ80 823 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 PIP5KL1Q5T9C9 394 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ANKRD20A1Q5TYW2 823 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ANKRD20A3Q5VUR7 823 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 FBXL19Q6PCT2 694 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 KDELC1Q6UW63 502 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GDPD4Q6W3E5 623 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 SYT10Q6XYQ8 523 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ERN2Q76MJ5 926 aaKnown RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 PRPF39Q86UA1 669 aaKnown RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 ZC3H18Q86VM9 953 aaKnown RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 CBARPQ8N350 705 aaPredicted RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 CCDC89Q8N998 374 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 TMEM145Q8NBT3 493 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 DENND6BQ8NEG7 585 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 LRRC45Q96CN5 670 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 C16orf45Q96MC5 204 aaPredicted RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 FRMD8Q9BZ67 464 aaPredicted RBP8.95□□□□□ -0.98
DDX56-211ENST00000479602 CDH19Q9H159 772 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 TRABDQ9H4I3 376 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 SUV39H2Q9H5I1 410 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 GOLGA6AQ9NYA3 693 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 FAM153AQ9UHL3 310 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 RIMKLBQ9ULI2 386 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 MRFAP1Q9Y605 127 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 ATMQ13315 3056 aa8.95□□□□□ -0.98
DDX56-211ENST00000479602 COL5A1P20908 1838 aaPredicted RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 ZNF106Q9H2Y7 1883 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 RGSL1A5PLK6 1076 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 FAM149AA5PLN7 773 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ESPNB1AK53 854 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 BHMG1C9JSJ3 638 aaPredicted RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 H7C0C1 242 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 KRIT1O00522 736 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 YKT6O15498 198 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TSPAN6O43657 245 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PPFIA2O75334 1257 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 LEFTY1O75610 366 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 RNASEH2AO75792 299 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 PGLSO95336 258 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 AP2A1O95782 977 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PRLP01236 227 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 JCHAINP01591 159 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 FGF1P05230 155 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ADRB3P13945 408 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TPSB2P20231 275 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 EPHA8P29322 1005 aaPredicted RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 CXCR5P32302 372 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ADRA1AP35348 466 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ACTN2P35609 894 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 MMP12P39900 470 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ATP5OP48047 213 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ACADVLP49748 655 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 DRG2P55039 364 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 GEMP55040 296 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PPP2CBP62714 309 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PPP2CAP67775 309 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TUBB4BP68371 445 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SKOR1P84550 965 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 BCL2L1Q07817 233 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 OVGP1Q12889 678 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ILKQ13418 452 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PTK6Q13882 451 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TPSAB1Q15661 275 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 UGP2Q16851 508 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 PROX2Q3B8N5 592 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TMEM52BQ4KMG9 183 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 KIAA1161Q6NSJ0 714 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 DARS2Q6PI48 645 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 CCDC137Q6PK04 289 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 DHRS13Q6UX07 377 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 RANBP10Q6VN20 620 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 HOOK3Q86VS8 718 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 GATAD2AQ86YP4 633 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SLC25A45Q8N413 288 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 MNS1Q8NEH6 495 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SPATA4Q8NEY3 305 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 HNRNPLLQ8WVV9 542 aaKnown RBP8.94□□□□□ -0.98
DDX56-211ENST00000479602 PIH1D2Q8WWB5 315 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SEC14L1Q92503 715 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SNX19Q92543 992 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SCRN2Q96FV2 425 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 OMDQ99983 421 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 SEMA3CQ99985 751 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 GORASP1Q9BQQ3 440 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 ADGRE3Q9BY15 652 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 TM6SF2Q9BZW4 377 aa8.94□□□□□ -0.98
DDX56-211ENST00000479602 LRRC40Q9H9A6 602 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms