RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SYT17Q9BSW7 474 aa3.03□□□□□ -1.92
HPS3-205ENST00000478525 WDR12Q9GZL7 423 aaKnown RBP3.03□□□□□ -1.92
HPS3-205ENST00000478525 CHODLQ9H9P2 273 aa3.03□□□□□ -1.92
HPS3-205ENST00000478525 NLRC4Q9NPP4 1024 aa3.03□□□□□ -1.92
HPS3-205ENST00000478525 SMYD2Q9NRG4 433 aa3.03□□□□□ -1.92
HPS3-205ENST00000478525 SRP68Q9UHB9 627 aaKnown RBP3.03□□□□□ -1.92
HPS3-205ENST00000478525 DLGAP4Q9Y2H0 992 aa3.03□□□□□ -1.92
HPS3-205ENST00000478525 C17orf113A0A1B0GUU1 675 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 PABPN1LA6NDY0 278 aaKnown RBP3.02□□□□□ -1.93
HPS3-205ENST00000478525 STX16-NPEPL1H3BU86 382 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 STX16O14662 325 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 IGLV1-44P01699 117 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 CYC1P08574 325 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 EDN2P20800 178 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 GRIK2Q13002 908 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 ITGADQ13349 1161 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 GPATCH4Q5T3I0 446 aaKnown RBP3.02□□□□□ -1.93
HPS3-205ENST00000478525 DENND1BQ6P3S1 775 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 C17orf99Q6UX52 265 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 ATF7IPQ6VMQ6 1270 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 TAOK1Q7L7X3 1001 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 KIAA2013Q8IYS2 634 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 ANKRD13AQ8IZ07 590 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 TRIM58Q8NG06 486 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 HCAR2Q8TDS4 363 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 TMEM190Q8WZ59 177 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 ART5Q96L15 291 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 WDR13Q9H1Z4 485 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 RCOR1Q9UKL0 485 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 LRCH1Q9Y2L9 728 aa3.02□□□□□ -1.93
HPS3-205ENST00000478525 GOLGA6L9A6NEM1 432 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 PER2O15055 1255 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 ZNF821O75541 412 aaPredicted RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 PARNO95453 639 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 SLC2A4P14672 509 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 GNB3P16520 340 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 HNRNPH2P55795 449 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 YWHAZP63104 245 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 ICA1Q05084 483 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 CUL4BQ13620 913 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 TIGD6Q17RP2 521 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 CCDC96Q2M329 555 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 WDR38Q5JTN6 314 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 FAM53AQ6NSI3 398 aaPredicted RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 CACNA2D3Q8IZS8 1091 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 STPG4Q8N801 248 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 WDR20Q8TBZ3 569 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 CNOT9Q92600 299 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 PCYT2Q99447 389 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.01□□□□□ -1.93
HPS3-205ENST00000478525 NUF2Q9BZD4 464 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 TWSG1Q9GZX9 223 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 KCNN2Q9H2S1 579 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 TFB2MQ9H5Q4 396 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 UPF2Q9HAU5 1272 aaKnown RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 MKKSQ9NPJ1 570 aaPredicted RBP3.01□□□□□ -1.93
HPS3-205ENST00000478525 RPS10P5Q9NQ39 176 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 CHPF2Q9P2E5 772 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 STON1Q9Y6Q2 735 aa3.01□□□□□ -1.93
HPS3-205ENST00000478525 A0A0J9YWU9 116 aa3□□□□□ -1.93
HPS3-205ENST00000478525 IGHV4-39P01824 125 aa3□□□□□ -1.93
HPS3-205ENST00000478525 PRSS56P0CW18 603 aa3□□□□□ -1.93
HPS3-205ENST00000478525 ERVK-10P10266 1014 aa3□□□□□ -1.93
HPS3-205ENST00000478525 ETFAP13804 333 aa3□□□□□ -1.93
HPS3-205ENST00000478525 DDIT3P35638 169 aa3□□□□□ -1.93
HPS3-205ENST00000478525 CHRNDQ07001 517 aa3□□□□□ -1.93
HPS3-205ENST00000478525 FOXO1Q12778 655 aa3□□□□□ -1.93
HPS3-205ENST00000478525 GTF2H2Q13888 395 aa3□□□□□ -1.93
HPS3-205ENST00000478525 FAM83BQ5T0W9 1011 aa3□□□□□ -1.93
HPS3-205ENST00000478525 GTF2H2CQ6P1K8 395 aa3□□□□□ -1.93
HPS3-205ENST00000478525 TAAR8Q969N4 342 aa3□□□□□ -1.93
HPS3-205ENST00000478525 ZNF653Q96CK0 615 aa3□□□□□ -1.93
HPS3-205ENST00000478525 STAMBPL1Q96FJ0 436 aa3□□□□□ -1.93
HPS3-205ENST00000478525 SCRN2Q96FV2 425 aa3□□□□□ -1.93
HPS3-205ENST00000478525 ZNF570Q96NI8 536 aa3□□□□□ -1.93
HPS3-205ENST00000478525 CMKLR1Q99788 373 aa3□□□□□ -1.93
HPS3-205ENST00000478525 OPRPNQ99935 248 aaPredicted RBP3□□□□□ -1.93
HPS3-205ENST00000478525 EPHX3Q9H6B9 360 aa3□□□□□ -1.93
HPS3-205ENST00000478525 ERVMER34-1Q9H9K5 563 aa3□□□□□ -1.93
HPS3-205ENST00000478525 METTL14Q9HCE5 456 aaKnown RBP3□□□□□ -1.93
HPS3-205ENST00000478525 CTNNAL1Q9UBT7 734 aa3□□□□□ -1.93
HPS3-205ENST00000478525 CARD8Q9Y2G2 431 aa3□□□□□ -1.93
HPS3-205ENST00000478525 A0A087X002 238 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 CTAGE9A4FU28 777 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 IPO5O00410 1097 aaKnown RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 PRKNO60260 465 aaPredicted RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 CSTBP04080 98 aaKnown RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 MMP2P08253 660 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 CTAGE8P0CG41 777 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 MMP14P50281 582 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 TERF1P54274 439 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 GRIK3Q13003 919 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 GAGE5Q13069 117 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 GAGE6Q13070 117 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 ZFP69Q49AA0 526 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 KCTD18Q6PI47 426 aaPredicted RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 CTAGE4Q8IX94 777 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 ANKRD52Q8NB46 1076 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms