RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MS4A14Q96JA4 679 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 BMFQ96LC9 184 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 SPATA13Q96N96 652 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 LENG8Q96PV6 779 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-222ENST00000478095 FCRL5Q96RD9 977 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 TRIB3Q96RU7 358 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 GORASP1Q9BQQ3 440 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 C1QTNF7Q9BXJ2 289 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 ADGRE3Q9BY15 652 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 ZDHHC5Q9C0B5 715 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 GDF3Q9NR23 364 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 PPIL1Q9Y3C6 166 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
HDAC6-222ENST00000478095 SPAG17Q6Q759 2223 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 C1orf232A0A0U1RR37 186 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 ANKRD66B4E2M5 251 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 OPHN1O60890 802 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 CLDN7O95471 211 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 CER1O95813 267 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 C1SP09871 688 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 MSNP26038 577 aaKnown RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 LIMK1P53667 647 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 RPL26P61254 145 aaKnown RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 GNG11P61952 73 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 OLIG2Q13516 323 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 PDE1CQ14123 709 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 OASLQ15646 514 aaKnown RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 ZNF542PQ5EBM4 170 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 RFLNAQ6ZTI6 216 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 Q6ZVL8 140 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 PRUNE1Q86TP1 453 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 IQCHQ86VS3 1027 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 PELI3Q8N2H9 469 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 SLC25A41Q8N5S1 370 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 PLA2G15Q8NCC3 412 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 NUS1Q96E22 293 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 COQ10AQ96MF6 247 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 WDR24Q96S15 920 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 ELF4Q99607 663 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 APOL2Q9BQE5 337 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 MLPHQ9BV36 600 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 FSD1LQ9BXM9 530 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 CD84Q9UIB8 345 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 RPL26L1Q9UNX3 145 aaKnown RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 SHOC2Q9UQ13 582 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 ZNF148Q9UQR1 794 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 OR1A2Q9Y585 309 aa10.28□□□□□ -0.76
HDAC6-222ENST00000478095 TNRC6BQ9UPQ9 1833 aaKnown RBP10.28□□□□□ -0.76
HDAC6-222ENST00000478095 WDR87Q6ZQQ6 2873 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 CFAP69A5D8W1 941 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 GOLGA6CA6NDK9 693 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 GOLGA6BA6NDN3 693 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 C5orf60A6NFR6 353 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 K7ESM1 405 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SLC30A4O14863 429 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF185O15231 689 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SDC3O75056 442 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 METTL18O95568 372 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 NDST3O95803 873 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 IFNB1P01574 187 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 ATXN1LP0C7T5 689 aaKnown RBP10.27□□□□□ -0.77
HDAC6-222ENST00000478095 GOLGA6DP0CG33 693 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 ETS1P14921 441 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 TNNT3P45378 269 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-222ENST00000478095 RABIFP47224 123 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 CCT8P50990 548 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 GEMP55040 296 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 PFN3P60673 137 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 PTSQ03393 145 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 OVGP1Q12889 678 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 MPP3Q13368 585 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SPARCL1Q14515 664 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 PRPSAP1Q14558 356 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 INPP5AQ14642 412 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SLC14A2Q15849 920 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF423Q2M1K9 1284 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 LYSMD3Q7Z3D4 306 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 DTD2Q96FN9 168 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 OSBPL9Q96SU4 736 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 FICDQ9BVA6 458 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 AP1M1Q9BXS5 423 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 FRMD8P1Q9BZ68 369 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-222ENST00000478095 TM7SF3Q9NS93 570 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 DNAAF2Q9NVR5 837 aaKnown RBP10.27□□□□□ -0.77
HDAC6-222ENST00000478095 GOLGA6AQ9NYA3 693 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SNX12Q9UMY4 172 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF711Q9Y462 761 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 SPO11Q9Y5K1 396 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 HS3ST3A1Q9Y663 406 aa10.27□□□□□ -0.77
HDAC6-222ENST00000478095 A0A1B0GTQ1 180 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 LOC285095A0A1B0GVY8 99 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 DCDC2BA2VCK2 349 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 PSMD11O00231 422 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 AURKAO14965 403 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 MAGEC1O60732 1142 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 USP12O75317 370 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms