RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ETV3P41162 512 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 SKOR1P84550 965 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 PARGQ86W56 976 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 LRRC49Q8IUZ0 686 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 CBARPQ8N350 705 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-209ENST00000477554 ZNF548Q8NEK5 533 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-209ENST00000477554 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-209ENST00000477554 ALG3Q92685 438 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 TSACCQ96A04 125 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-209ENST00000477554 FAM118BQ9BPY3 351 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 POLR1EQ9GZS1 481 aaKnown RBP17.69■□□□□ 0.42
PTPN7-209ENST00000477554 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 SAR1BQ9Y6B6 198 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 LAMA5O15230 3695 aa17.69■□□□□ 0.42
PTPN7-209ENST00000477554 MAGEC1O60732 1142 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 HEXIM1O94992 359 aaKnown RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 ZRANB2O95218 330 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 HNF1BP35680 557 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 CETN2P41208 172 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 CD86P42081 329 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 ACADVLP49748 655 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 SUOXP51687 545 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 IFI35P80217 286 aaPredicted RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 ACOX1Q15067 660 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 PROX2Q3B8N5 592 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 ARMC12Q5T9G4 340 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 TIGD7Q6NT04 549 aaPredicted RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 VSIG1Q86XK7 387 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 SFTPA2Q8IWL1 248 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 RCOR2Q8IZ40 523 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 OXR1Q8N573 874 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 EXD1Q8NHP7 514 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 GATA6Q92908 595 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 FATE1Q969F0 183 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 RBM41Q96IZ5 413 aaKnown RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 PBKQ96KB5 322 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 AGAP3Q96P47 875 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 MCCC1Q96RQ3 725 aaPredicted RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 RBM15Q96T37 977 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■■■■□ 20.8
PTPN7-209ENST00000477554 CDC6Q99741 560 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 APOOQ9BUR5 198 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 CLPBQ9H078 707 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 CARD9Q9H257 536 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 MRPL40Q9NQ50 206 aaKnown RBP17.68■□□□□ 0.42
PTPN7-209ENST00000477554 CD84Q9UIB8 345 aa17.68■□□□□ 0.42
PTPN7-209ENST00000477554 TMEM202A6NGA9 273 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 CES2O00748 559 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 FANCGO15287 622 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 C1SP09871 688 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 JUNDP17535 347 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 MX2P20592 715 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 VIPR1P32241 457 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 COPS2P61201 443 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 AGERQ15109 404 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 ALG11Q2TAA5 492 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 DEFB133Q30KQ1 61 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 CRTC1Q6UUV9 634 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 Q6ZVL8 140 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 KDELC2Q7Z4H8 507 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 BBS5Q8N3I7 341 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 SPATA22Q8NHS9 363 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 PDXPQ96GD0 296 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 LRRC61Q9BV99 259 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 PHTF1Q9UMS5 762 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 ZFHX4Q86UP3 3567 aa17.67■□□□□ 0.42
PTPN7-209ENST00000477554 BPTFQ12830 3046 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 YKT6O15498 198 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 MT-CYBP00156 380 aaPredicted RBP17.66■□□□□ 0.42
PTPN7-209ENST00000477554 FUCA1P04066 466 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 PTPN3P26045 913 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
PTPN7-209ENST00000477554 WASHC5Q12768 1159 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 TUBB2AQ13885 445 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 GALNT3Q14435 633 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 PRKD1Q15139 912 aaPredicted RBP17.66■□□□□ 0.42
PTPN7-209ENST00000477554 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 LRRC66Q68CR7 880 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 MACC1Q6ZN28 852 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 ZC3H18Q86VM9 953 aaKnown RBP17.66■□□□□ 0.42
PTPN7-209ENST00000477554 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 PHACTR4Q8IZ21 702 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 LPCAT1Q8NF37 534 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 OR4C6Q8NH72 309 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 LMX1AQ8TE12 382 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 SCRN2Q96FV2 425 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 AGAP2Q99490 1192 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 TUBB2BQ9BVA1 445 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 UBP1Q9NZI7 540 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 PPIL1Q9Y3C6 166 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 IGF2RP11717 2491 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 USP24Q9UPU5 2620 aa17.66■□□□□ 0.42
PTPN7-209ENST00000477554 A0A0J9YYE9 177 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 SOD1P00441 154 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 TRBC1P01850 177 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 PIRTP0C851 137 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 THOP1P52888 689 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms