RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PTPN18Q99952 460 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 SH3GL3Q99963 347 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 FAM124BQ9H5Z6 455 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 LIMD1Q9UGP4 676 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 RAD54BQ9Y620 910 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 ZFP37Q9Y6Q3 630 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 EVPLLA8MZ36 301 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 NRP2O60462 931 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 FGF1P05230 155 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 T-ENOLP0DO92 83 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 FGF3P11487 239 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 RANBP1P43487 201 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 EFL1Q7Z2Z2 1120 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 C11orf96Q7Z7L8 435 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 LRRC49Q8IUZ0 686 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 IRGQQ8WZA9 623 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MED8Q96G25 268 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 STN1Q9H668 368 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 NOL11Q9H8H0 719 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 EBF2Q9HAK2 575 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 DYRK4Q9NR20 520 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 TMLHEQ9NVH6 421 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MOCS1Q9NZB8 636 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 AP4B1Q9Y6B7 739 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 A0A0J9YYE9 177 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 IQCF5A8MTL0 148 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 CLOCKO15516 846 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 ATP5BP06576 529 aaKnown RBP11.04□□□□□ -0.64
COL27A1-204ENST00000477421 HLA-DPA1P20036 260 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 THOP1P52888 689 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 AQP4P55087 323 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 GNA12Q03113 381 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 NEDD8Q15843 81 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 LRRC73Q5JTD7 316 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 SPPL2BQ8TCT7 592 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 TMEM174Q8WUU8 243 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 LPGAT1Q92604 370 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 PPM1MQ96MI6 270 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 PANX3Q96QZ0 392 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 RTKNQ9BST9 563 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 EBF3Q9H4W6 596 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 TMEM39AQ9NV64 488 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 CEP290O15078 2479 aa11.04□□□□□ -0.64
COL27A1-204ENST00000477421 CCDC162PA2VCL2 907 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RAD51BO15315 384 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 HAPLN1P10915 354 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 SCNN1AP37088 669 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ACTR3P61158 418 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 GALNT2Q10471 571 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 LRRTM3Q86VH5 581 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 HERC6Q8IVU3 1022 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RDH11Q8TC12 318 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 SKA1Q96BD8 255 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 FCRL5Q96RD9 977 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ZDHHC6Q9H6R6 413 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 FBRSL1Q9HCM7 1045 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 OXSMQ9NWU1 459 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 EVLQ9UI08 416 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 LNPEPQ9UIQ6 1025 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RAI2Q9Y5P3 530 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 TCRBV5S1A1TA0A578 114 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ACLYP53396 1101 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 VAC14Q08AM6 782 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ATXN7L2Q5T6C5 722 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 WLSQ5T9L3 541 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 SNRNP27Q8WVK2 155 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 AUTS2Q8WXX7 1259 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 C19orf60Q96EN9 201 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 CORO1BQ9BR76 489 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 DNAJC28Q9NX36 388 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 FKBPLQ9UIM3 349 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RPL26L1Q9UNX3 145 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF711Q9Y462 761 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 TRIM38O00635 465 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 NTRK1P04629 796 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 VCLP18206 1134 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 GGT5P36269 586 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RPL38P63173 70 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 CDC16Q13042 620 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 DYNC1I2Q13409 638 aaKnown RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 BLMHQ13867 455 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 STARD3Q14849 445 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 TCEA2Q15560 299 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 RALGPS2Q86X27 583 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 FOPNLQ96NB1 174 aa11.03□□□□□ -0.64
COL27A1-204ENST00000477421 C2orf49Q9BVC5 232 aaPredicted RBP11.03□□□□□ -0.64
COL27A1-204ENST00000477421 TNKS2Q9H2K2 1166 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms