RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 FGF1P05230 155 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 PPARGP37231 505 aaPredicted RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 CDH4P55283 916 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 ACVR1Q04771 509 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 BTKQ06187 659 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 TRIP10Q15642 601 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 GABPB2Q8TAK5 448 aaPredicted RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 TSPAN17Q96FV3 270 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 CDKN2AIPNLQ96HQ2 116 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 PSKH2Q96QS6 385 aa16.66■□□□□ 0.26
TVP23B-202ENST00000476139 COPG1Q9Y678 874 aaKnown RBP16.66■□□□□ 0.26
TVP23B-202ENST00000476139 HOXA2O43364 376 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 RNASEH1O60930 286 aaKnown RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 FKBP6O75344 327 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 WISP3O95389 354 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 EPOP01588 193 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 THRAP10827 490 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CDKN1CP49918 316 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 PPP1R3AQ16821 1122 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 FBXW8Q8N3Y1 598 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 MDGA1Q8NFP4 955 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 OR4L1Q8NH43 312 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 GDPD5Q8WTR4 605 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CINPQ9BW66 212 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 ZNF385DQ9H6B1 395 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 UBA2Q9UBT2 640 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 FNDC3AQ9Y2H6 1198 aaKnown RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 SLCO1B7G3V0H7 640 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 PPP6CO00743 305 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 SDHDO14521 159 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 TXNDC9O14530 226 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 MT-CO1P00395 513 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 PRLP01236 227 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 LYNP07948 512 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 RBP1P09455 135 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 TCN1P20061 433 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 KPNA2P52292 529 aaKnown RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 AQP4P55087 323 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CDH13P55290 713 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 OXCT1P55809 520 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CYLC2Q14093 348 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 BHMTQ93088 406 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CWH43Q9H720 699 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 MAGEA13PA6NCF6 341 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 RPP40O75818 363 aaKnown RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 NDST3O95803 873 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 EFEMP2O95967 443 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 PRDX6P30041 224 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CLEC6AQ6EIG7 209 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CUZD1Q86UP6 607 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 SNX31Q8N9S9 440 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 OR4K2Q8NGD2 314 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 ZNF461Q8TAF7 563 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 RCN3Q96D15 328 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 IGSF21Q96ID5 467 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 CDRT15Q96T59 188 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 POLR3BQ9NW08 1133 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-202ENST00000476139 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
TVP23B-202ENST00000476139 KDELR3O43731 214 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 SUPT7LO94864 414 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ENO3P13929 434 aaPredicted RBP16.64■□□□□ 0.25
TVP23B-202ENST00000476139 PMLP29590 882 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 PLD1Q13393 1074 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 CYTH1Q15438 398 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ACBD5Q5T8D3 534 aaPredicted RBP16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 GALNT7Q86SF2 657 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 DSELQ8IZU8 1212 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 CPSF7Q8N684 471 aaKnown RBP16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ZNF599Q96NL3 588 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 TSC22D3Q99576 134 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ZBTB26Q9HCK0 441 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 FAM50BQ9Y247 325 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ATP6AP2A0A1C7CYW4 349 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 CCDC189A1A4V9 331 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 LRRC14BA6NHZ5 514 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 H3BMM5 538 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 INSIG1O15503 277 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ATP6AP2O75787 350 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 SIX3O95343 332 aaPredicted RBP16.64■□□□□ 0.25
TVP23B-202ENST00000476139 RHOCP08134 193 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 HK2P52789 917 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 MTTPP55157 894 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 HTRA3P83110 453 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 GRAMD1BQ3KR37 738 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 AUTS2Q8WXX7 1259 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 MAELQ96JY0 434 aaKnown RBP16.64■□□□□ 0.25
TVP23B-202ENST00000476139 CATSPERZQ9NTU4 200 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
TVP23B-202ENST00000476139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.63■□□□□ 0.25
TVP23B-202ENST00000476139 UBA6A0AVT1 1052 aaPredicted RBP16.63■□□□□ 0.25
TVP23B-202ENST00000476139 SNAP91O60641 907 aa16.63■□□□□ 0.25
TVP23B-202ENST00000476139 CD1DP15813 335 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms