RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 ACOX1Q15067 660 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 QPCTQ16769 361 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 LRRC66Q68CR7 880 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 ESRP1Q6NXG1 681 aaKnown RBP17.99■□□□□ 0.47
EFNA1-204ENST00000474413 Q6ZVL8 140 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 USP45Q70EL2 814 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 CCDC50Q8IVM0 306 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 PHACTR4Q8IZ21 702 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 LPCAT1Q8NF37 534 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 SPATA22Q8NHS9 363 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 KIAA1524Q8TCG1 905 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
EFNA1-204ENST00000474413 OR1E3Q8WZA6 343 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 NUS1Q96E22 293 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 GORASP1Q9BQQ3 440 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 PCDH9Q9HC56 1237 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 FGF22Q9HCT0 170 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 SEPT10Q9P0V9 454 aa17.99■□□□□ 0.47
EFNA1-204ENST00000474413 BPTFQ12830 3046 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 SCAMP1O15126 338 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 LDOC1O95751 146 aaPredicted RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 JUNDP17535 347 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 STC1P52823 247 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 THOP1P52888 689 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 KIAA1024LP59773 190 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 HNRNPKP61978 463 aaKnown RBP eCLIP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 PTSQ03393 145 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 NOMO1Q15155 1222 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 DENND2CQ68D51 928 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 ZC3H18Q86VM9 953 aaKnown RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 PAF1Q8N7H5 531 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 EID2BQ96D98 161 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 CALR3Q96L12 384 aaKnown RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 TEKT5Q96M29 485 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 WDR24Q96S15 920 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 LYSMD1Q96S90 227 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 NLGN3Q9NZ94 848 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 APOBEC3BQ9UH17 382 aaKnown RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 APOBEC2Q9Y235 224 aaKnown RBP17.98■□□□□ 0.47
EFNA1-204ENST00000474413 NEUROG3Q9Y4Z2 214 aa17.98■□□□□ 0.47
EFNA1-204ENST00000474413 CCDC66A2RUB6 948 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 PSMD11O00231 422 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 AQP9O43315 295 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 TRIM16O95361 564 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 MT-CYBP00156 380 aaPredicted RBP17.97■□□□□ 0.47
EFNA1-204ENST00000474413 CES1P23141 567 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 GSDMDP57764 484 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 COPS2P61201 443 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 CCZ1BP86790 482 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 CCZ1P86791 482 aaPredicted RBP17.97■□□□□ 0.47
EFNA1-204ENST00000474413 GALNT3Q14435 633 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 TEX44Q53QW1 395 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 ODF2Q5BJF6 829 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 PNCKQ6P2M8 343 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 DHRS13Q6UX07 377 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 TFB1MQ8WVM0 346 aaKnown RBP17.97■□□□□ 0.47
EFNA1-204ENST00000474413 P3H4Q92791 437 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 TSACCQ96A04 125 aaPredicted RBP17.97■□□□□ 0.47
EFNA1-204ENST00000474413 TBATAQ96M53 351 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 FAM118BQ9BPY3 351 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 OSBPL8Q9BZF1 889 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 SLC25A51Q9H1U9 297 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 GLOD4Q9HC38 313 aa17.97■□□□□ 0.47
EFNA1-204ENST00000474413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
EFNA1-204ENST00000474413 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 APOC2P02655 101 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 FUCA1P04066 466 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 NFKB1P19838 968 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 RWDD2BP57060 319 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 RPL26P61254 145 aaKnown RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 OTUD4Q01804 1114 aaKnown RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 KIF5AQ12840 1032 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 C1orf61Q13536 156 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 PTK2BQ14289 1009 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 TCEA2Q15560 299 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 SMAD1Q15797 465 aaKnown RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 SLC14A2Q15849 920 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 DEFB133Q30KQ1 61 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 KDELC1Q6UW63 502 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 HEATR4Q86WZ0 1026 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 ZNF567Q8N184 647 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 LMX1AQ8TE12 382 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 SCAMP4Q969E2 229 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 OXNAD1Q96HP4 312 aaPredicted RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 AGAP2Q99490 1192 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 ABCG8Q9H221 673 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 MRPL40Q9NQ50 206 aaKnown RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 CD84Q9UIB8 345 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 RPL26L1Q9UNX3 145 aaKnown RBP17.96■□□□□ 0.47
EFNA1-204ENST00000474413 EFR3BQ9Y2G0 817 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 CSNK1G3Q9Y6M4 447 aa17.96■□□□□ 0.47
EFNA1-204ENST00000474413 DMXL2Q8TDJ6 3036 aa17.95■□□□□ 0.46
EFNA1-204ENST00000474413 TCRBV7S2A1N4TA0A589 114 aa17.95■□□□□ 0.46
EFNA1-204ENST00000474413 F5H423 210 aaPredicted RBP17.95■□□□□ 0.46
EFNA1-204ENST00000474413 CASC3O15234 703 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms