RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 RIMKLBQ9ULI2 386 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TRIP11Q15643 1979 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 A0A1W2PP18 115 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 CCDC78A2IDD5 438 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 GOLGA8CPA6NN73 597 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SOBPA7XYQ1 873 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 DFFAO00273 331 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ARPC2O15144 300 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 MLYCDO95822 493 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 NTRK1P04629 796 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SLC2A3P11169 496 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 CDH3P22223 829 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 EEF1DP29692 281 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ADRA1AP35348 466 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 GTF2A2P52657 109 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SLC5A3P53794 718 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 NRG1Q02297 640 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 RAB39AQ14964 217 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 RFX4Q33E94 735 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 FAM98BQ52LJ0 330 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 TREML2Q5T2D2 321 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 METTL23Q86XA0 190 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 CEP97Q8IW35 865 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 RNF169Q8NCN4 708 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SNRNP27Q8WVK2 155 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 HDAC10Q969S8 669 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 LRRC58Q96CX6 371 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 AURKBQ96GD4 344 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 UGT2B28Q9BY64 529 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 RAD21L1Q9H4I0 556 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ANKHQ9HCJ1 492 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SDR39U1Q9NRG7 319 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ZIM2Q9NZV7 527 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 PSME2Q9UL46 239 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ORC6Q9Y5N6 252 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 MYO18AQ92614 2054 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ABCB7O75027 752 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 LRIG2O94898 1065 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 MBL2P11226 248 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 CDH1P12830 882 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 DARSP14868 501 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 CKMT2P17540 419 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 OGNP20774 298 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ATP6V1B2P21281 511 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 EEF1B2P24534 225 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 LMO2P25791 158 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 GABRB3P28472 473 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 HOXC13P31276 330 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 BCAP31P51572 246 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 MAP3K7CLP57077 242 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 LILRA4P59901 499 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 IL18R1Q13478 541 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SKIV2LQ15477 1246 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 GPR107Q5VW38 600 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SYPL2Q5VXT5 272 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ESRP1Q6NXG1 681 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 KCTD8Q6ZWB6 473 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 LYSMD3Q7Z3D4 306 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 FAM35AQ86V20 835 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 DENND6AQ8IWF6 608 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ADGRG5Q8IZF4 528 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 C8orf59Q8N0T1 100 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 SVOPLQ8N434 492 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 HDAC2Q92769 488 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 TMIGD2Q96BF3 282 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 NSMCE2Q96MF7 247 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ZMAT2Q96NC0 199 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ALG2Q9H553 416 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 COMMD8Q9NX08 183 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 TMED5Q9Y3A6 229 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 EVPLQ92817 2033 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 TMEM233B4DJY2 109 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 NME4O00746 187 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 PPEF2O14830 753 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 EEDO75530 441 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 SOAT2O75908 522 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 CLPXO76031 633 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 JUNP05412 331 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 CCR1P32246 355 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 IRF5Q13568 498 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 ITGA7Q13683 1181 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 VGLL4Q14135 290 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 BTG3Q14201 252 aaPredicted RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 SMAD1Q15797 465 aaKnown RBP6.12□□□□□ -1.43
HERC4-209ENST00000473533 TRIM16LQ309B1 348 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 BLOC1S3Q6QNY0 202 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 LAYNQ6UX15 382 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 RANBP10Q6VN20 620 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 THAP5Q7Z6K1 395 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SLC15A3Q8IY34 581 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 NPWQ8N729 165 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 PDZD8Q8NEN9 1154 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 TBC1D15Q8TC07 691 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 USP33Q8TEY7 942 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 TWIST2Q8WVJ9 160 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 TUBGCP3Q96CW5 907 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 SH3GL1Q99961 368 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 DCUN1D5Q9BTE7 237 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms