RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OC90Q02509 493 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TRIM28Q13263 835 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SAMD4BQ5PRF9 694 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GPR158Q5T848 1215 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SATL1Q86VE3 508 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CHERPQ8IWX8 916 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ART5Q96L15 291 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CST11Q9H112 138 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CCDC182A6NF36 153 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 EPHX1P07099 455 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MSL3P1P0C860 447 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 NCK1P16333 377 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TGFB2P61812 414 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 UNC5AQ6ZN44 842 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 VASH1Q7L8A9 365 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MYLPFQ96A32 169 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RNF31Q96EP0 1072 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 EGFL7Q9UHF1 273 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 OAS3Q9Y6K5 1087 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 KDM6BO15054 1643 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RECQL5O94762 991 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MAGP20916 626 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MSX1P28360 303 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PERM1Q5SV97 790 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TNS4Q8IZW8 715 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PDCD2LQ9BRP1 358 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZYG11BQ9C0D3 744 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MYRFQ9Y2G1 1151 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RIPK2O43353 540 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TPST2O60704 377 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GJB1P08034 283 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MNDAP41218 407 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SPESP1Q6UW49 350 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PPP1R14BQ96C90 147 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PLGRKTQ9HBL7 147 aa13.26□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 STBD1O95210 358 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 AKR1D1P51857 326 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GMFBP60983 142 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 OAFQ86UD1 273 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTPN18Q99952 460 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CCDC86Q9H6F5 360 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LDAHQ9H6V9 325 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SMURF1Q9HCE7 757 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TFECO14948 347 aaPredicted RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ELNP15502 786 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RYKP34925 604 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TTPAP49638 278 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RARRES1P49788 294 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SP140Q13342 867 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZBTB6Q15916 424 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CFAP206Q8IYR0 622 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZSCAN1Q8NBB4 408 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TSEN15Q8WW01 171 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FCRL4Q96PJ5 515 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TISP43B9A030 160 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RFXANKO14593 260 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CDC25CP30307 473 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CHAF1BQ13112 559 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 AADACL2Q6P093 401 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CD84Q9UIB8 345 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TNPO3Q9Y5L0 923 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SLC28A1O00337 649 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LGALS2P05162 132 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CYP3A4P08684 503 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TFEBP19484 476 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ITPKAP23677 461 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CTBP1Q13363 440 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZNF730Q6ZMV8 503 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTGR2Q8N8N7 351 aaPredicted RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HIPK3Q9H422 1215 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 KPNA4O00629 521 aaPredicted RBP13.25□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PGRMC2O15173 223 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms