RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 C1orf74Q96LT6 269 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 SLC25A23Q9BV35 468 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 MAGEH1Q9H213 219 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 GOLPH3LQ9H4A5 285 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 PHPT1Q9NRX4 125 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 DONSONQ9NYP3 566 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 RCOR1Q9UKL0 485 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 SUFUQ9UMX1 484 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 HPSEQ9Y251 543 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ATP8A1Q9Y2Q0 1164 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 CENPEQ02224 2701 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 DOPEY1Q5JWR5 2465 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TNRC6AQ8NDV7 1962 aaKnown RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 LRP4O75096 1905 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 A6NL46 340 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 F5H423 210 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 KDELR3O43731 214 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 KRT86O43790 486 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CREB3O43889 395 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 BUB1BO60566 1050 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 SNX2O60749 519 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RASSF9O75901 435 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 KIAA0754O94854 1291 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 SMC2O95347 1197 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ASMTLO95671 621 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CCNYL3P0C7X3 344 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PNMA6AP0CW24 399 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ATXN8OSP0DMR3 200 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MYCLP1P12525 358 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RHOQP17081 205 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 FLT3P36888 993 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MMP12P39900 470 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 GPR3P46089 330 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MAPKAPK2P49137 400 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PMS2P54278 862 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 KRT85P78386 507 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 GPLD1P80108 840 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MC2RQ01718 297 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CDK18Q07002 472 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RAPSNQ13702 412 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RAPGEF1Q13905 1077 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 NR6A1Q15406 480 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 C15orf59Q2T9L4 293 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RAB6CQ53S08 254 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CPZQ66K79 652 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CRYBG3Q68DQ2 2970 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ATL3Q6DD88 541 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PNCKQ6P2M8 343 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 SLC47A2Q86VL8 602 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 DNAAF5Q86Y56 855 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 NRROSQ86YC3 692 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 NAGSQ8N159 534 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PELI3Q8N2H9 469 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 PTCD2Q8WV60 388 aaKnown RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 SMARCE1Q969G3 411 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MARVELD3Q96A59 401 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 C18orf8Q96DM3 657 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 DPYSL5Q9BPU6 564 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ZPBPQ9BS86 351 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 TRIM55Q9BYV6 548 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MAGEB5Q9BZ81 275 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 SCAND2PQ9GZW5 306 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 KLC2Q9H0B6 622 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 RAB6CQ9H0N0 254 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 STN1Q9H668 368 aaKnown RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 DKK3Q9UBP4 350 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ERRFI1Q9UJM3 462 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 TMEM98Q9Y2Y6 226 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 MAP4K5Q9Y4K4 846 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 CELSR2Q9HCU4 2923 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 LRBAP50851 2863 aa6.87□□□□□ -1.31
HDAC1-204ENST00000471488 ZSCAN5CA6NGD5 496 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 BECN2A8MW95 431 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 FAM72CH0Y354 149 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 TNFRSF10CO14798 259 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 P4HA2O15460 535 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 DIAPH2O60879 1101 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 LRCH4O75427 683 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 CREG1O75629 220 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 LRIG2O94898 1065 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 PLEKP08567 350 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF28P17035 718 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 SLC9A1P19634 815 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 EPHB2P29323 1055 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 SERPINA4P29622 427 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 ADCY8P40145 1251 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 SUOXP51687 545 aa6.86□□□□□ -1.31
HDAC1-204ENST00000471488 RPS18P62269 152 aaKnown RBP6.86□□□□□ -1.31
HDAC1-204ENST00000471488 HHEXQ03014 270 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms