RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FCARP24071 287 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 POU4F1Q01851 419 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 CHI3L2Q15782 390 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 FASTKD1Q53R41 847 aaKnown RBP18.15■□□□□ 0.5
SMC4-211ENST00000469858 SPATA21Q7Z572 469 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 ZSWIM9Q86XI8 627 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 VOPP1Q96AW1 172 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 TUBGCP5Q96RT8 1024 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 SIRPGQ9P1W8 387 aa18.15■□□□□ 0.5
SMC4-211ENST00000469858 KIF26AQ9ULI4 1882 aaPredicted RBP18.14■□□□□ 0.49
SMC4-211ENST00000469858 SCN8AQ9UQD0 1980 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 BIRC5O15392 142 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 TULP3O75386 442 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 CISD3P0C7P0 127 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 PSMA3P25788 255 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 PMLP29590 882 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 CCDC153Q494R4 210 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 TANGO2Q6ICL3 276 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 OTOAQ7RTW8 1153 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 SDCCAG8Q86SQ7 713 aaPredicted RBP18.14■□□□□ 0.49
SMC4-211ENST00000469858 ANKS4BQ8N8V4 417 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 CHST14Q8NCH0 376 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 E2F7Q96AV8 911 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 TSNARE1Q96NA8 513 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 OLFM1Q99784 485 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 CDH7Q9ULB5 785 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 ACOT9Q9Y305 439 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 PKP3Q9Y446 797 aa18.14■□□□□ 0.49
SMC4-211ENST00000469858 C1orf232A0A0U1RR37 186 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 OTOL1A6NHN0 477 aaPredicted RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 DNAJC6O75061 913 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 POP4O95707 220 aaKnown RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 CRABP2P29373 138 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 MC4RP32245 332 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 NNMTP40261 264 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 RECQLP46063 649 aaPredicted RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 STC1P52823 247 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 RAD51Q06609 339 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 HECTD2Q5U5R9 776 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 TRIM42Q8IWZ5 723 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 TNS4Q8IZW8 715 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 KCTD4Q8WVF5 259 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 GRAMD1AQ96CP6 724 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 EID2BQ96D98 161 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 THOC1Q96FV9 657 aaKnown RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 MRGPRX3Q96LB0 322 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 TSSK1BQ9BXA7 367 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 C1QTNF1Q9BXJ1 281 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 SUV39H2Q9H5I1 410 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 TRPV4Q9HBA0 871 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 ZFP14Q9HCL3 533 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 THG1LQ9NWX6 298 aaKnown RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 OBP2AQ9NY56 170 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 STARD13Q9Y3M8 1113 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 USP15Q9Y4E8 981 aaPredicted RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 TTC34A8MYJ7 566 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 UGT2B4P06133 528 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 KCNA4P22459 653 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 ALDH3A1P30838 453 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 BMP8BP34820 402 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 HNF1BP35680 557 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 HMGCLP35914 325 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 PCLAFQ15004 111 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 TYSND1Q2T9J0 566 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 VITQ6UXI7 678 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 ETFBKMTQ8IXQ9 262 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 CENPLQ8N0S6 344 aaPredicted RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 OR2A12Q8NGT7 310 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 GRIN3AQ8TCU5 1115 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 FAM83CQ9BQN1 747 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 CPEB1Q9BZB8 566 aaKnown RBP18.13■□□□□ 0.49
SMC4-211ENST00000469858 NMRAL1Q9HBL8 299 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 IL17CQ9P0M4 197 aa18.13■□□□□ 0.49
SMC4-211ENST00000469858 CAPN8A6NHC0 703 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 KLF11O14901 512 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 CDKN1CP49918 316 aaPredicted RBP18.12■□□□□ 0.49
SMC4-211ENST00000469858 MESP2Q0VG99 397 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 ZRANB3Q5FWF4 1079 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 ZCCHC23Q6ZST2 131 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 WFIKKN2Q8TEU8 576 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 ECHDC3Q96DC8 303 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 FAM96AQ9H5X1 160 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 ECT2Q9H8V3 914 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 ZFYVE1Q9HBF4 777 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 COPG2Q9UBF2 871 aa18.12■□□□□ 0.49
SMC4-211ENST00000469858 UBA6A0AVT1 1052 aaPredicted RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 A8MX80 341 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ATP5BP06576 529 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 DLDP09622 509 aaKnown RBP18.11■□□□□ 0.49
SMC4-211ENST00000469858 SLC6A11P48066 632 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 GLRBP48167 497 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 BST1Q10588 318 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 IFT88Q13099 833 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 PEX6Q13608 980 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ITIH4Q14624 930 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 GAB4Q2WGN9 574 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ATAT1Q5SQI0 421 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 ATG16L1Q676U5 607 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 CES5AQ6NT32 575 aa18.11■□□□□ 0.49
SMC4-211ENST00000469858 PSAPL1Q6NUJ1 521 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms