RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RPS24P62847 133 aaKnown RBP14.69□□□□□ -0.06
CBWD3-205ENST00000469687 OGFRL1Q5TC84 451 aaPredicted RBP14.69□□□□□ -0.06
CBWD3-205ENST00000469687 SLC22A9Q8IVM8 553 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 LILRA2Q8N149 483 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 BCL7CQ8WUZ0 217 aaPredicted RBP14.69□□□□□ -0.06
CBWD3-205ENST00000469687 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.06
CBWD3-205ENST00000469687 GIMAP2Q9UG22 337 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 ASB3Q9Y575 518 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 PCDHGA7Q9Y5G6 932 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 SPO11Q9Y5K1 396 aa14.69□□□□□ -0.06
CBWD3-205ENST00000469687 ZFP37Q9Y6Q3 630 aaPredicted RBP14.69□□□□□ -0.06
CBWD3-205ENST00000469687 F5H5T6 163 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 UBXN8O00124 270 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ENPP3O14638 875 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 TBC1D4O60343 1298 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 RPP40O75818 363 aaKnown RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ALDH2P05091 517 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 UQCRBP14927 111 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 RPL17P18621 184 aaKnown RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 HLA-DPA1P20036 260 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 RING1Q06587 406 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 FASTKQ14296 549 aaKnown RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 RFTN1Q14699 578 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 AGKQ53H12 422 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 FBXO48Q5FWF7 155 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 LRRC8DQ7L1W4 858 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 NSUN5Q96P11 429 aaKnown RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 GCNAQ96QF7 691 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 TRIB3Q96RU7 358 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 STARD7Q9NQZ5 370 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SCN5AQ14524 2016 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SLC38A8A6NNN8 435 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 E7ENX8 843 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ACOT8O14734 319 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SERPINF2P08697 491 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ZNF37AP17032 561 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 VCLP18206 1134 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 INHBCP55103 352 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 FOXA1P55317 472 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SH3BP2P78314 561 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 PTK2BQ14289 1009 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SQLEQ14534 574 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ARMC3Q5W041 872 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 REP15Q6BDI9 236 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 PTGR2Q8N8N7 351 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 OR4L1Q8NH43 312 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 BRSK1Q8TDC3 778 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 L3HYPDHQ96EM0 354 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SPATA17Q96L03 361 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 SPON2Q9BUD6 331 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 COPS7BQ9H9Q2 264 aaPredicted RBP14.68□□□□□ -0.06
CBWD3-205ENST00000469687 CATSPERZQ9NTU4 200 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 ADA2Q9NZK5 511 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 IKZF3Q9UKT9 509 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 PCDHB7Q9Y5E2 793 aa14.68□□□□□ -0.06
CBWD3-205ENST00000469687 A0A0U1RQS6 177 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 A0A1B0GTL3 188 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PSMD12O00232 456 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 SNUPNO95149 360 aaKnown RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 ALDOCP09972 364 aaKnown RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MTHFD2P13995 350 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 STC1P52823 247 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PSME3P61289 254 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 HERVK_113P63132 956 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 SP3Q02447 781 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 GNA12Q03113 381 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 RALGDSQ12967 914 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 LRP8Q14114 963 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PTPRRQ15256 657 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PAOXQ6QHF9 649 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 LAYNQ6UX15 382 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 ISLR2Q6UXK2 745 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 CDKN2AIPNLQ96HQ2 116 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 FAR2Q96K12 515 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PRICKLE1Q96MT3 831 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 ERVK-6Q9BXR3 956 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MRPL1Q9BYD6 325 aaKnown RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PCDHAC1Q9H158 963 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 VCX3BQ9H321 246 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 CACNA2D2Q9NY47 1150 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 RIMS3Q9UJD0 308 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 FAM50BQ9Y247 325 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MED16Q9Y2X0 877 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MOXD2PA6NHM9 499 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 ENO4A6NNW6 628 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 H3BNC9 293 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 TXNDC9O14530 226 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 ACSL4O60488 711 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 AOC2O75106 756 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 BCAS2O75934 225 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 CDK14O94921 469 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 CDKN1CP49918 316 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 SCNN1BP51168 640 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 GALNT1Q10472 559 aaPredicted RBP14.67□□□□□ -0.06
CBWD3-205ENST00000469687 MED21Q13503 144 aa14.67□□□□□ -0.06
CBWD3-205ENST00000469687 PFKFB4Q16877 469 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms