RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KCNE2Q9Y6J6 123 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 STON1Q9Y6Q2 735 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SPATA31A1Q5TZJ5 1347 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 UBR1Q8IWV7 1749 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 SIPA1L3O60292 1781 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-207ENST00000468925 DCCP43146 1447 aa4.88□□□□□ -1.63
SF3B1-207ENST00000468925 KIF1AQ12756 1690 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PLCH1Q4KWH8 1693 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 BCORQ6W2J9 1755 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 A0A1W2PPM1 405 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 A0A1W2PQ72 361 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TUBAL3A6NHL2 446 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF487B1APH4 448 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PLK4O00444 970 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 APOL1O14791 398 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CCNT1O60563 726 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GLRA3O75311 464 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 UPK1BO75841 260 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 OR7A10O76100 309 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLITRK5O94991 958 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NADKO95544 446 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TGM6O95932 706 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLC4A1P02730 911 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 APOA4P06727 396 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RNASE1P07998 156 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 DLATP10515 647 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CYP2D6P10635 497 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 UMPSP11172 480 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CHRNB2P17787 502 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLC9A1P19634 815 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RRM1P23921 792 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 DNAJB1P25685 340 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PIK3R1P27986 724 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MAPK4P31152 587 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 HTR7P34969 479 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 KRT20P35900 424 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 BMPR1AP36894 532 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CAPGP40121 348 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 IL12RB1P42701 662 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MCAMP43121 646 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MAGEA11P43364 429 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 KCNJ1P48048 391 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GIPRP48546 466 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 EIF6P56537 245 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PEX3P56589 373 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CDKL1Q00532 357 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PRKCEQ02156 737 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GNA12Q03113 381 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MVKQ03426 396 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SMARCB1Q12824 385 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SEMA3BQ13214 749 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GRB10Q13322 594 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PMS2P3Q13401 168 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ALCAMQ13740 583 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NFIXQ14938 502 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ACOX1Q15067 660 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CHI3L2Q15782 390 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 HIST2H2ACQ16777 129 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PPM1JQ5JR12 505 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SAMD4BQ5PRF9 694 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CLVS2Q5SYC1 327 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 VWA5B1Q5TIE3 1220 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 LIN9Q5TKA1 542 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PIK3R6Q5UE93 754 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SHEQ5VZ18 495 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TTBK2Q6IQ55 1244 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 RINT1Q6NUQ1 792 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TRIM72Q6ZMU5 477 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SH2D5Q6ZV89 423 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NECAB2Q7Z6G3 386 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MRPL10Q7Z7H8 261 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 USP37Q86T82 979 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 LUZP2Q86TE4 346 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ADCK1Q86TW2 530 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 KIF18BQ86Y91 864 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 WDR49Q8IV35 697 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLC38A6Q8IZM9 456 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NDUFAF2Q8N183 169 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF786Q8N393 782 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PPM1KQ8N3J5 372 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 DHRSXQ8N5I4 330 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 CCDC185Q8N715 623 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 FAM47BQ8NA70 645 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NGDNQ8NEJ9 315 aaKnown RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 ST13P5Q8NFI4 369 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-207ENST00000468925 OR6Q1Q8NGQ2 317 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 GRIN3AQ8TCU5 1115 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SGCDQ92629 289 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 PROX1Q92786 737 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 NKD1Q969G9 470 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 SLC35C1Q96A29 364 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TMIGD2Q96BF3 282 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 DNAJC19Q96DA6 116 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 HDAC11Q96DB2 347 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 TMCO6Q96DC7 493 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 MCRS1Q96EZ8 462 aa4.87□□□□□ -1.63
SF3B1-207ENST00000468925 C11orf24Q96F05 449 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms