RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ACAD11Q709F0 780 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 MDGA1Q8NFP4 955 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 PTERQ96BW5 349 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 CNDP1Q96KN2 507 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 SLC22A12Q96S37 553 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
HPS1-208ENST00000467246 CATSPERZQ9NTU4 200 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
HPS1-208ENST00000467246 A0A0U1RQS6 177 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 A0A1B0GVM2 712 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 TCAF2A6NFQ2 919 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 SNAP91O60641 907 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 TSPAN8P19075 237 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 FDXRP22570 491 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 PRDX6P30041 224 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 PGM2L1Q6PCE3 622 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 TTC16Q8NEE8 873 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 OR4K2Q8NGD2 314 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 GPR150Q8NGU9 434 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 ACTRT2Q8TDY3 377 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 PEX13Q92968 403 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 CCDC124Q96CT7 223 aaKnown RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 NAF1Q96HR8 494 aaKnown RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 IRAK4Q9NWZ3 460 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 CDH22Q9UJ99 828 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 ARHGAP26Q9UNA1 814 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 TBC1D30Q9Y2I9 924 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 AIM2O14862 343 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 CD160O95971 181 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 PMLP29590 882 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 ARF5P84085 180 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 DSG1Q02413 1049 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 TWF1Q12792 350 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 DNAJB7Q7Z6W7 309 aaPredicted RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 HPS6Q86YV9 775 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
HPS1-208ENST00000467246 ZNF385DQ9H6B1 395 aa11.44□□□□□ -0.58
HPS1-208ENST00000467246 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 SDHDO14521 159 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 C1RP00736 705 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 F11P03951 625 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CCL5P13501 91 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 PPARGP37231 505 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 VHLP40337 213 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CDKN1CP49918 316 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 STC1P52823 247 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 BTKQ06187 659 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 TBL3Q12788 808 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 LAMB3Q13751 1172 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 LRRC74BQ6ZQY2 392 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 GLT6D1Q7Z4J2 308 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 SETD3Q86TU7 594 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 LPCAT1Q8NF37 534 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 EXT2Q93063 718 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 BHMTQ93088 406 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CCDC126Q96EE4 140 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 TMEM169Q96HH4 297 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 RTKNQ9BST9 563 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CCDC28BQ9BUN5 200 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 RETREG1Q9H6L5 497 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 NLE1Q9NVX2 485 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 POLR3BQ9NW08 1133 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 PACSIN3Q9UKS6 424 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 RGSL1A5PLK6 1076 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 UBFD1O14562 309 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 PRRG1O14668 218 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 CCNT2O60583 730 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 SMIM24O75264 130 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CRTAMO95727 393 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 SPATA31D3P0C874 917 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 THRAP10827 490 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CD1DP15813 335 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 MZF1P28698 734 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 SMAD3P84022 425 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 ZXDBP98169 803 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 TCHHL1Q5QJ38 904 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 TPGS2Q68CL5 300 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 SPATA31D4Q6ZUB0 917 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CHST9Q7L1S5 443 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 SDCCAG8Q86SQ7 713 aaPredicted RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 CUZD1Q86UP6 607 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 CPSF7Q8N684 471 aaKnown RBP11.43□□□□□ -0.58
HPS1-208ENST00000467246 DNAJC9Q8WXX5 260 aa11.43□□□□□ -0.58
HPS1-208ENST00000467246 MAELQ96JY0 434 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms