RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NEDD9Q14511 834 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 NAA25Q14CX7 972 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 ANKRD1Q15327 319 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 TAF5Q15542 800 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 MAP3K21Q5TCX8 1036 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 HIST2H2BDQ6DRA6 164 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 LINGO2Q7L985 606 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 KMT5CQ86Y97 462 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 BEST2Q8NFU1 509 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 MAGEC3Q8TD91 643 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF524Q96C55 264 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 COG8Q96MW5 612 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 CD180Q99467 661 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 REEP2Q9BRK0 252 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 FAM167BQ9BTA0 163 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 NUF2Q9BZD4 464 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 PEMTQ9UBM1 199 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 CTNNAL1Q9UBT7 734 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 HSPB7Q9UBY9 170 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 AMDHD2Q9Y303 409 aa2.88□□□□□ -1.95
GTF3C3-209ENST00000466862 TP53BP1Q12888 1972 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 CCDC194A0A1B0GVG4 234 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 CTAGE9A4FU28 777 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ANTXRLA6NF34 631 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ERI2A8K979 691 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 BCAT2O15382 392 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 TBX6O95947 436 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 PATE4P0C8F1 98 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 CTAGE8P0CG41 777 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 MYOD1P15172 320 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 CORO1AP31146 461 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 SHMT1P34896 483 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 FMO5P49326 533 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 RAD23BP54727 409 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ANO1Q5XXA6 986 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 TXNDC8Q6A555 127 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ARHGAP11AQ6P4F7 1023 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 KRBA2Q6ZNG9 492 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 TAOK1Q7L7X3 1001 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 TMTC1Q8IUR5 882 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 DHX40Q8IX18 779 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 CTAGE4Q8IX94 777 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF34Q8IZ26 560 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF485Q8NCK3 441 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 DMBX1Q8NFW5 382 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 RUFY2Q8WXA3 655 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 LGALS12Q96DT0 336 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF583Q96ND8 569 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 F2RL3Q96RI0 385 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 KXD1Q9BQD3 176 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 LBHD1Q9BQE6 289 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 GLIS2Q9BZE0 524 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 TTYH1Q9H313 450 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 MAGEE1Q9HCI5 957 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 ALKBH4Q9NXW9 302 aa2.87□□□□□ -1.95
GTF3C3-209ENST00000466862 GOLGA6L10A0A0M3HER8 536 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 TMEM202A6NGA9 273 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PMS2P5A8MQ11 134 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 AKR1B15C9JRZ8 316 aaPredicted RBP2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 TSPAN3O60637 253 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 FTCDO95954 541 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 NR1D1P20393 614 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 DCTP40126 519 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 TRAPPC10P48553 1259 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 EFNB1P98172 346 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PPIGQ13427 754 aaKnown RBP eCLIP2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 BRD3Q15059 726 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 KRT24Q2M2I5 525 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 C2orf68Q2NKX9 166 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 FBXO47Q5MNV8 452 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 WDR45BQ5MNZ6 344 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 RGMBQ6NW40 437 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 FBXO46Q6PJ61 603 aaPredicted RBP2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 SLC36A4Q6YBV0 504 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 QSOX2Q6ZRP7 698 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 ASB18Q6ZVZ8 466 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 ADGRG6Q86SQ4 1221 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 GPAT4Q86UL3 456 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 DSELQ8IZU8 1212 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 MAPK1IP1LQ8NDC0 245 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 SIN3AQ96ST3 1273 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PCYT2Q99447 389 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PAGR1Q9BTK6 254 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 LRRC1Q9BTT6 524 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 TKTL2Q9H0I9 626 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 C20orf141Q9NUB4 165 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 BEX4Q9NWD9 120 aaPredicted RBP2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PADI1Q9ULC6 663 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 OR2W1Q9Y3N9 320 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 PCDHGB3Q9Y5G1 929 aa2.86□□□□□ -1.95
GTF3C3-209ENST00000466862 IRAK2O43187 625 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 MT-CYBP00156 380 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 URODP06132 367 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 HMGB1P09429 215 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 DDX5P17844 614 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ALDH4A1P30038 563 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 PAPOLAP51003 745 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 CCR5P51681 352 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 RUNX1T1Q06455 604 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms