RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 MSANTD2Q6P1R3 559 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 LINGO4Q6UY18 593 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 TUBGCP3Q96CW5 907 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 VPS45Q9NRW7 570 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 PCDHGC4Q9Y5F7 938 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 C15orf38-AP3S2A0A0A6YYH1 394 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SERPINF2P08697 491 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ACLYP53396 1101 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 MRNIPQ6NTE8 343 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ZNF549Q6P9A3 640 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ARPINQ7Z6K5 226 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 OR4K2Q8NGD2 314 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 DIS3LQ8TF46 1054 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 C1orf74Q96LT6 269 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 MRM3Q9HC36 420 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 CATSPERZQ9NTU4 200 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SMPD4Q9NXE4 827 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 GPR39O43194 453 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ATXN1LP0C7T5 689 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 SH3BP2P78314 561 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SERINC3Q13530 473 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 CYTH1Q15438 398 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 OR4D1Q15615 310 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 RNF180Q86T96 592 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SATL1Q86VE3 508 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SCML4Q8N228 414 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 LPCAT1Q8NF37 534 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 CCDC126Q96EE4 140 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 C19orf60Q96EN9 201 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 LRCH3Q96II8 777 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 GSTO2Q9H4Y5 243 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 GKN1Q9NS71 199 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 AURKCQ9UQB9 309 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SRP72O76094 671 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 OAZ2O95190 189 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 TACR2P21452 398 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 SLC7A2P52569 658 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 STX5Q13190 355 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 CAPRIN1Q14444 709 aaKnown RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 VPS26BQ4G0F5 336 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 NADSYN1Q6IA69 706 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ADGRG6Q86SQ4 1221 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 OR4L1Q8NH43 312 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 LPGAT1Q92604 370 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 CINPQ9BW66 212 aaPredicted RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 PIF1Q9H611 641 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 EGFL7Q9UHF1 273 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 RNF112Q9ULX5 631 aa16.36■□□□□ 0.21
SLX4-202ENST00000466154 ZFP37Q9Y6Q3 630 aaPredicted RBP16.36■□□□□ 0.21
SLX4-202ENST00000466154 H3BMM5 538 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 SLC7A4O43246 635 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 RNASEH2AO75792 299 aaKnown RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 OR6B1O95007 311 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 SNRPB2P08579 225 aaKnown RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 CHRM3P20309 590 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 HTR7P34969 479 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 RGRP47804 291 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 TRIP4Q15650 581 aaPredicted RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 ZNF678Q5SXM1 525 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 BEND5Q7L4P6 421 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 TAS1R1Q7RTX1 841 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 RAB44Q7Z6P3 723 aaPredicted RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 LCA5Q86VQ0 697 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 LRRC49Q8IUZ0 686 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 ARHGAP18Q8N392 663 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 PCSK9Q8NBP7 692 aaKnown RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 LRTOMTQ8WZ04 291 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 MFSD1Q9H3U5 465 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 CACNA2D2Q9NY47 1150 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 BCAP29Q9UHQ4 241 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 FBP2O00757 339 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 PIP5K1BO14986 540 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 CES1P23141 567 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 RTP2Q5QGT7 225 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 PAQR3Q6TCH7 311 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 GLT6D1Q7Z4J2 308 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 SLC22A9Q8IVM8 553 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 HMGCLL1Q8TB92 370 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 ZNF483Q8TF39 744 aaPredicted RBP16.35■□□□□ 0.21
SLX4-202ENST00000466154 HBEGFQ99075 208 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 CENPKQ9BS16 269 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 AKTIPQ9H8T0 292 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 PCDHGA7Q9Y5G6 932 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 V9GYQ6 96 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
SLX4-202ENST00000466154 ZNF839A8K0R7 811 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 TRIM38O00635 465 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 NDUFS3O75489 264 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 UNC50Q53HI1 259 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 FAM45BPQ6NSW5 357 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 FAM45AQ8TCE6 357 aa16.34■□□□□ 0.21
SLX4-202ENST00000466154 UBXN10Q96LJ8 280 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms