RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 TRIM16O95361 564 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 MT-CO1P00395 513 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 WNT1P04628 370 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 TUBBP07437 444 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 ATXN1LP0C7T5 689 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 TBC1D3HP0C7X1 549 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 ERCC2P18074 760 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 C5AR1P21730 350 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 DRD3P35462 400 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 CTSKP43235 329 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 KCNJ1P48048 391 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 NR2C2P49116 596 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 CCT8P50990 548 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 PLK1P53350 603 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 CDH4P55283 916 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 DR1Q01658 176 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SNX1Q13596 522 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 HNRNPDQ14103 355 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 PAFAH1B3Q15102 231 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 NOMO1Q15155 1222 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 OASLQ15646 514 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 ARTNQ5T4W7 220 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 NCBP2-AS2Q69YL0 99 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 TBC1D3GQ6DHY5 549 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 TBC1D3CQ6IPX1 549 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 LRRC31Q6UY01 552 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 LINGO4Q6UY18 593 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SYDE1Q6ZW31 735 aaPredicted RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SLCO6A1Q86UG4 719 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 ZNF683Q8IZ20 524 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 TBC1D3Q8IZP1 549 aaPredicted RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SH2D3CQ8N5H7 860 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 OR7D4Q8NG98 312 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 PIP4K2CQ8TBX8 421 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 GRK7Q8WTQ7 553 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 HAUS1Q96CS2 278 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 TBC1D31Q96DN5 1066 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SERAC1Q96JX3 654 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 MYOCQ99972 504 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 FAM118BQ9BPY3 351 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 ETNK2Q9NVF9 386 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SAE1Q9UBE0 346 aaPredicted RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 DMGDHQ9UI17 866 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 VPS51Q9UID3 782 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 RALYQ9UKM9 306 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 SARDHQ9UL12 918 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 DNPEPQ9ULA0 475 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 NEU3Q9UQ49 428 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 APOBEC2Q9Y235 224 aaKnown RBP9.53□□□□□ -0.88
ATG3-203ENST00000465980 MSRB2Q9Y3D2 182 aa9.53□□□□□ -0.88
ATG3-203ENST00000465980 SHROOM3Q8TF72 1996 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 IGLV3-10A0A075B6K4 115 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 E9PAM4 449 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 K7ERQ8 282 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 KPNA3O00505 521 aaPredicted RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 MCF2LO15068 1137 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 FGF10O15520 208 aaPredicted RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 TTI1O43156 1089 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 ATP9BO43861 1147 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 HEXIM1O94992 359 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 ECEL1O95672 775 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 ITGAVP06756 1048 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 SRCP12931 536 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 GLDCP23378 1020 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 MCM3P25205 808 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 EPHB2P29323 1055 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 OR1E1P30953 314 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 EIF3EP60228 445 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 MRPS25P82663 173 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 SLC7A5Q01650 507 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 GBE1Q04446 702 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 CNTN1Q12860 1018 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 XRCC4Q13426 336 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 WDR93Q6P2C0 686 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 NPNTQ6UXI9 565 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 BZW1Q7L1Q6 419 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 MARCH9Q86YJ5 346 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 GATAD2AQ86YP4 633 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 ATP11CQ8NB49 1132 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 GRIN3AQ8TCU5 1115 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 KLK6Q92876 244 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 C2orf49Q9BVC5 232 aaPredicted RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 PARD6BQ9BYG5 372 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 TSPAN10Q9H1Z9 355 aaPredicted RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 TNKS2Q9H2K2 1166 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 DTLQ9NZJ0 730 aa9.52□□□□□ -0.89
ATG3-203ENST00000465980 PPARGC1AQ9UBK2 798 aaKnown RBP9.52□□□□□ -0.89
ATG3-203ENST00000465980 RAB21Q9UL25 225 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms