RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TRAF3Q13114 568 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 EFNB3Q15768 340 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ASTE1Q2TB18 679 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 PCGF3Q3KNV8 242 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 TDRD12Q587J7 1177 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 PPP6R3Q5H9R7 873 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 RAB41Q5JT25 222 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 FNBP1LQ5T0N5 605 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 WDR78Q5VTH9 848 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 OTUD1Q5VV17 481 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 LCN10Q6JVE6 187 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CES5AQ6NT32 575 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 C8orf82Q6P1X6 216 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 TSSK4Q6SA08 328 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 LCTLQ6UWM7 567 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CRELD2Q6UXH1 353 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 PQLC2Q6ZP29 291 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CFAP77Q6ZQR2 320 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 C9orf47Q6ZRZ4 202 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SEPT14Q6ZU15 432 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CHST9Q7L1S5 443 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 GSTA5Q7RTV2 222 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CHERPQ8IWX8 916 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 HACE1Q8IYU2 909 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CLIP4Q8N3C7 705 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SPATA6LQ8N4H0 392 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 Q8N9P0 234 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SCCPDHQ8NBX0 429 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SCFD2Q8WU76 684 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ADAMTS14Q8WXS8 1223 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 POMGNT1Q8WZA1 660 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SMARCE1Q969G3 411 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM120BQ96EK7 910 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ZC3HAV1LQ96H79 300 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 C1orf74Q96LT6 269 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 CMTM3Q96MX0 182 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 LRFN5Q96NI6 719 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF570Q96NI8 536 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 FCRL4Q96PJ5 515 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SERINC2Q96SA4 455 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ACOX2Q99424 681 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SH3GL2Q99962 352 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC29A3Q9BZD2 475 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 DCLK3Q9C098 648 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 EBF3Q9H4W6 596 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SYNCQ9H7C4 482 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 RANGRFQ9HD47 186 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 BPIFA1Q9NP55 256 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 HINT3Q9NQE9 182 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 PLSCR4Q9NRQ2 329 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM51Q9NW97 253 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 OR6C3Q9NZP0 311 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 SUCLA2Q9P2R7 463 aaPredicted RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 ACSL5Q9ULC5 683 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 PCDHA7Q9UN72 937 aa1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 AAR2Q9Y312 384 aaKnown RBP1.95□□□□□ -2.1
NUCKS1-202ENST00000464938 A0A0U1RQJ8 604 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 A0A1W2PR77 199 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 DYTNA2CJ06 578 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM90A10PA6NDY2 464 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CD8B2A6NJW9 211 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 BTBD18B2RXH4 712 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 B4DGG1 531 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SNAP23O00161 211 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 TIMM23O14925 209 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 ASAP2O43150 1006 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PAPSS1O43252 624 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NDUFS3O75489 264 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC25A12O75746 678 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE7O76087 117 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NKX2-2O95096 273 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 OAZ2O95190 189 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SYF2O95926 243 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GLUD1P00367 558 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CRYABP02511 175 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CYC1P08574 325 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 HOXC6P09630 235 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE12FP0CL80 117 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE12GP0CL81 117 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE12IP0CL82 117 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SELLP14151 372 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PORP16435 677 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 HOXC9P31274 260 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 ACSL1P33121 698 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PIGAP37287 484 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 FASLGP48023 281 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GLUD2P49448 558 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PLCD1P51178 756 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CLCN3P51790 818 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CDH8P55286 799 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NLRP5P59047 1200 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 BRWD1-AS2P59051 145 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 BNC1Q01954 994 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PPATQ06203 517 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GRIK2Q13002 908 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE1Q13065 139 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GAGE4Q13068 117 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 ITGADQ13349 1161 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NAE1Q13564 534 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms